FMO10665.5prime Sequence
1172 bp (1031 high quality bases) assembled on 2011-06-24
> FMO10665.5prime
CAGTCGACATGGAAGATAGAAACGAAGAAATTGAACCGTGCAGGAGTATT
GGACCACATGAGTTGGACGTCGTAAAAAGCCAGGCGGTGATTAAGTTGTC
TCCCGTTCCAGTGCCAGCCCACTTCAAGCGGCTGGAGTGCAACACCAACT
TGAATCTTCCGCCTCTCAACTGGCTGACAACGTCGCACAGCAGTCATGGA
TTACACCAGGCCCTCTACCAAAGTGCTGGCTTTGCCAGTTTTCGATTGGG
CCAGATGTTTCCGGACTGCGTGGGAGAGGTGGATGTGGTCAGCGACGCGG
AGAATATCAAGCAGCTACTCAAGTTGCCTTACAGCGCGAAGAGCGCCATC
AGCATGGTTGTGCACAAGGTGGGCAACACGTTGCTCCTGGATGAGTTCGA
CATCCAGAAGTATCTGCTGCGAAAGGCGGATGACGACTGGAAGTGGCTAA
GATCCTTTATTCTGGAGCACGTCCTGACCTATGGAGATACACAGCACAAC
TACTGCCTAAAGGAGCGGTCCCGGGAGGCGCTGCAAACAAAGAATTTGCT
GTCCAAGTTCCTGTATCACAGCCTTAAGCAAACTGGTGATGAGCTGGACT
ACGATGTGGCCAATACACCCACTCAGTTAACCAGCCGCAAACAGGGATTG
CCCATCACGGGACCAGTTCTCCCAGAACCGAAAATAGAGGAGAACGTGCC
AGACCCAAAGTCGAGCCATGCCTTCAATAGAAACGTGGTCTGGACATTTG
AGGATATACGCATGCTTATCGGCACAGATATGCCCATATTTGGAGGACCC
AACAGGCCGTGCATCAGCTTGCGTTTAACGGATGCGGCTCAGCCTATAAA
TGTGTTAACCGGAATCGATTACTGGCTGGACAATCTTATGTGTAATGTGC
CCGAGTGTGATGTGCTATCATCTGGATGGCATTGTCCAAAGTACGAGATC
ATCAAGGACCGAGGACCTGCCGTACCTGAGAACTCGCAGGTTTCGCCCCA
AGTGTTCCGCAACGTCGCACAAAAACATTCTGGCTTTCTTAAGCCATGCC
ACCAAGGCGGTCACACCTTATTGGCTTCTTAGGGCGCCACGGATGACGTT
GTCTCAGTGTACGATCTACTTACATTATGCCCAAAGTTCATGGCAATTCT
GGAAGTCCGAATGAGATCCCAC
FMO10665.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:41:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6511-RB | 4498 | CG6511-RB | 266..1399 | 9..1137 | 5135 | 97.6 | Plus |
| CG6511-RA | 4320 | CG6511-RA | 88..1221 | 9..1137 | 5135 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:41:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8721661..8722768 | 30..1131 | 4755 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:41:11 has no hits.
FMO10665.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:26 Download gff for
FMO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6511-RA | 83..1231 | 1..1151 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:53:15 Download gff for
FMO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6511-RA | 83..1231 | 1..1151 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:18 Download gff for
FMO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6511-RA | 83..1231 | 1..1151 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:18 Download gff for
FMO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8721661..8722783 | 30..1151 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:53:15 Download gff for
FMO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8714761..8715883 | 30..1151 | 97 | | Plus |
