FMO10672.5prime Sequence
1096 bp (948 high quality bases) assembled on 2011-06-24
> FMO10672.5prime
CAGTCGACATGTTTCAGCGACACACGTCGGTGATCGATCTTCATCGTTGG
AATTATCCTGAATGCTGGCCGTTTGATAGAAACGGAAAAGTCGAAAACAT
ATATGTAATGGAACATTCCGATCCCGTGCCTTATCAACAGCTATCGACAT
TATCGCCGACCACCGCACTATACTCGAACTTTAACAACTCTTTGGAAGCA
GGAACCGCAGAAAGACTACGCCTTAATAAAACTGGGTCACAGGTCCACAG
CCTATATGTCGGCGACGGTCAAGTGCAAAATGCTTCTGAACCCTTATCTT
TTCCCAGCCACCTTAATCTGTACCAATATGTTCGTACCCCGGCAAACTTC
ACTATTAACAGCCGCAACCGATATATTCCGTACTATAACAATCGTTCCTA
CTCTGCTTCAACAACTGGTTTCCCTATAGCCAGTACTCCGCTGATCAGCA
GCCATGCGCACATCCAAGACCAACAAGGTGCAGCGTCTTATCAAACGATT
GTTCCGCTTTATCAGACCGCAAGCCACTGTGCGCAGCAACATACAACATT
GGCATCGGTAGCTCCAATCGTGGACAATTCATTCGTTGAAAGCACCACTT
GCCCCATGGCCGGCATCACCTCTCACAACATCAAAATGAAAATGATTCCT
CCCAATGTATTGTTGCCTTGCTCCAGGCCTACGACAACCGCGGTGACCAT
CCAAAGGTCAACCGGAGAAGACGGTGGAGATAAAGAAAGGTCATACTTTT
GCTAAGATTACGGAGATGAGCGATGCTGTTACTTTGCAGATCACCAAACT
TGGACTACTCGCTGGACGAATCACATATACGCAGCTTTCTACTTAATCAG
CTTAAGCCCATTACGCCAGTTGTGTCACTTGTCTTCGAGGGAAGCTCTAT
GCCAAAGTCACTGTTCCAGATTCTTTATTTTCGCAAAGCAAGTCGTCTCA
AATTTGCACCGCAAGAAGATTGACACAAACGCATGCTGTCAGTATACTCG
AGATTCCTCCCTCACGAGGTCAACCACTTCGCTTGCAGTCGCAGACTCAG
AGCATCAACCTCCATGTAAGTAGAACATCATCGTCACTTAGTATGC
FMO10672.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17018-RF | 4749 | CG17018-RF | 499..1537 | 9..1044 | 4865 | 98.5 | Plus |
CG17018-RD | 4468 | CG17018-RD | 218..1256 | 9..1044 | 4865 | 98.5 | Plus |
CG17018-RE | 4815 | CG17018-RE | 598..1583 | 62..1044 | 4600 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22363430..22364288 | 62..921 | 4155 | 99.7 | Plus |
2L | 23513712 | 2L | 22354917..22354969 | 9..61 | 265 | 100 | Plus |
2L | 23513712 | 2L | 22365193..22365281 | 930..1015 | 265 | 94.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:36:41 has no hits.
FMO10672.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:49 Download gff for
FMO10672.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17018-RD | 214..1242 | 9..1036 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:23:49 Download gff for
FMO10672.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17018-RD | 218..1246 | 9..1036 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:35 Download gff for
FMO10672.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17018-RD | 218..1246 | 9..1036 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:35 Download gff for
FMO10672.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22354917..22354965 | 9..57 | 100 | -> | Plus |
2L | 22363430..22364294 | 58..929 | 98 | -> | Plus |
2L | 22365193..22365303 | 930..1036 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:23:49 Download gff for
FMO10672.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22354917..22354965 | 9..57 | 100 | <- | Plus |
arm_2L | 22363423..22364294 | 58..929 | 98 | -> | Plus |
arm_2L | 22365193..22365303 | 930..1036 | 91 | == | Plus |