Clone FMO10672 Report

Search the DGRC for FMO10672

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:106
Well:72
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17018-RD
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10672.5prime Sequence

1096 bp (948 high quality bases) assembled on 2011-06-24

> FMO10672.5prime
CAGTCGACATGTTTCAGCGACACACGTCGGTGATCGATCTTCATCGTTGG
AATTATCCTGAATGCTGGCCGTTTGATAGAAACGGAAAAGTCGAAAACAT
ATATGTAATGGAACATTCCGATCCCGTGCCTTATCAACAGCTATCGACAT
TATCGCCGACCACCGCACTATACTCGAACTTTAACAACTCTTTGGAAGCA
GGAACCGCAGAAAGACTACGCCTTAATAAAACTGGGTCACAGGTCCACAG
CCTATATGTCGGCGACGGTCAAGTGCAAAATGCTTCTGAACCCTTATCTT
TTCCCAGCCACCTTAATCTGTACCAATATGTTCGTACCCCGGCAAACTTC
ACTATTAACAGCCGCAACCGATATATTCCGTACTATAACAATCGTTCCTA
CTCTGCTTCAACAACTGGTTTCCCTATAGCCAGTACTCCGCTGATCAGCA
GCCATGCGCACATCCAAGACCAACAAGGTGCAGCGTCTTATCAAACGATT
GTTCCGCTTTATCAGACCGCAAGCCACTGTGCGCAGCAACATACAACATT
GGCATCGGTAGCTCCAATCGTGGACAATTCATTCGTTGAAAGCACCACTT
GCCCCATGGCCGGCATCACCTCTCACAACATCAAAATGAAAATGATTCCT
CCCAATGTATTGTTGCCTTGCTCCAGGCCTACGACAACCGCGGTGACCAT
CCAAAGGTCAACCGGAGAAGACGGTGGAGATAAAGAAAGGTCATACTTTT
GCTAAGATTACGGAGATGAGCGATGCTGTTACTTTGCAGATCACCAAACT
TGGACTACTCGCTGGACGAATCACATATACGCAGCTTTCTACTTAATCAG
CTTAAGCCCATTACGCCAGTTGTGTCACTTGTCTTCGAGGGAAGCTCTAT
GCCAAAGTCACTGTTCCAGATTCTTTATTTTCGCAAAGCAAGTCGTCTCA
AATTTGCACCGCAAGAAGATTGACACAAACGCATGCTGTCAGTATACTCG
AGATTCCTCCCTCACGAGGTCAACCACTTCGCTTGCAGTCGCAGACTCAG
AGCATCAACCTCCATGTAAGTAGAACATCATCGTCACTTAGTATGC

FMO10672.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG17018-RF 4749 CG17018-RF 499..1537 9..1044 4865 98.5 Plus
CG17018-RD 4468 CG17018-RD 218..1256 9..1044 4865 98.5 Plus
CG17018-RE 4815 CG17018-RE 598..1583 62..1044 4600 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22363430..22364288 62..921 4155 99.7 Plus
2L 23513712 2L 22354917..22354969 9..61 265 100 Plus
2L 23513712 2L 22365193..22365281 930..1015 265 94.4 Plus
Blast to na_te.dros performed on 2014-11-26 23:36:41 has no hits.

FMO10672.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:49 Download gff for FMO10672.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17018-RD 214..1242 9..1036 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:23:49 Download gff for FMO10672.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17018-RD 218..1246 9..1036 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:35 Download gff for FMO10672.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17018-RD 218..1246 9..1036 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:35 Download gff for FMO10672.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 22354917..22354965 9..57 100 -> Plus
2L 22363430..22364294 58..929 98 -> Plus
2L 22365193..22365303 930..1036 91   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:23:49 Download gff for FMO10672.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22354917..22354965 9..57 100 <- Plus
arm_2L 22363423..22364294 58..929 98 -> Plus
arm_2L 22365193..22365303 930..1036 91 == Plus