FMO10674.5prime Sequence
1169 bp (1050 high quality bases) assembled on 2011-06-24
> FMO10674.5prime
CAGTCGACATGGCAGCACCAGAGACGGGCAACACGGGCTCCACAGGATCC
GCTGGCTCGACAGGATCGGGATCGGGATCGGGATCGGGAAGTGGGAGCTC
CTCAGATCCAGCGAATGGACGGGAGGCCCGTAACCTTGCCGAAAAACAGC
GACGGGATAAGCTTAATGCCAGCATCCAGGAGCTGGCCACCATGGTACCA
CATGCAGCCGAATCCTCCCGTCGCCTGGACAAAACCGCCGTCCTTAGATT
CGCCACCCATGGCCTGAGACTTCAGTATGTCTTTGGCAAGTCCGCTTCCA
GACGTCGCAAGAAAACCGGCCTCAAGGGAACGGGTATGTCTGCCTCACCT
GTCGGAGATCTACCCAATCCCAGTCTGCATCTAACGGACACTCTAATGCA
ACTGCTGGACTGCTGCTTCCTCACCCTAACCTGCAGTGGCCAAATCGTTT
TGGTATCCACCAGCGTGGAGCAGCTATTGGGTCACTGTCAGTCCGATTTG
TATGGCCAGAATCTACTGCAGATCACGCATCCCGATGATCAGGATCTGTT
AAGACAGCAGCTAATACCCAGGGATATAGAGACCCTGTTCTATCAGCATC
AGCACCACCAGCAGCAGGGGCACAATCCCCAGCAGCACTCCACTTCCACG
TCGGCCTCAACTTCGGGCAGTGATCTGGAGGAGGAGGAAATGGAGACGGA
GGAACACCGTCTGGGTCGGCAGCAGGGAGAGGCGGACGATGACGAGGATC
ACCCGTACAACCGACGAACACCCAGCCCGCGGAGAATGGCCCATTTGGCG
ACCATTGATGACCGACTACGCATGGATCGGCGCTGCTTTACCGTCCGCTT
GGCTAGGGCTTCCACGCGAGCGGAGGCCACGCGTCATTACGAGCGGGTTA
AGATCGATGGCTGCTTTCGTCGCAGTGACTCCTCCTTAACCGGAGGTGCC
GCTGCCAACTATCCGATTGTCTCCCAGCTGATACGACGCTCGAGAAACAC
CAATATGCTTGCTGCTGCTGCATGCAGTGCAGCAGAAGCGGGCGACGGTG
CCGCCCCCAGCAACGATGCATTGGCCCAGGCGGCGCTGCACGGGATTTAG
CGTGCCAATGATATTTGTCCCTGGTGCCATGGCAAGGTGCTGCAGAAGAC
GGCGCTGAAGAAACCGAAG
FMO10674.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Met-RB | 5088 | CG1705-RB | 745..1873 | 9..1143 | 5300 | 98.5 | Plus |
| Met-RA | 3756 | CG1705-RA | 745..1873 | 9..1143 | 5300 | 98.5 | Plus |
| gce-RE | 5120 | CG42739-RE | 1964..2150 | 384..570 | 275 | 76.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11616868..11617953 | 9..1097 | 5130 | 98.7 | Plus |
| X | 23542271 | X | 15315368..15315554 | 384..570 | 275 | 76.5 | Plus |
Blast to na_te.dros performed 2014-11-26 23:36:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1540..1592 | 592..644 | 130 | 71.7 | Plus |
FMO10674.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:50 Download gff for
FMO10674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Met-RA | 734..1873 | 1..1146 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:24:53 Download gff for
FMO10674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Met-RA | 736..1875 | 1..1146 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:39 Download gff for
FMO10674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Met-RA | 736..1875 | 1..1146 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:39 Download gff for
FMO10674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11616859..11617998 | 1..1146 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:24:53 Download gff for
FMO10674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11510892..11512031 | 1..1146 | 98 | | Plus |
