FMO10675.5prime Sequence
1115 bp (920 high quality bases) assembled on 2011-06-24
> FMO10675.5prime
CAGTCGACATGGCGGTGATTAATAAAGCCGGAAATGTGATTGCCCTCCTG
CTGGTTAAGCTTCAGCTAATCCTGCTGTTCACGCTGTCAGTTTCCGGAGA
GTTGCCGCAGCTGGACTACGGCAGCTTGTCCGCATCCCTGGAGGAGGATG
CTATTGACCCACTCACGGCGATGGCACCCTTCGCCAACTCCCTGGTCACC
GAAGAATCGGCGCAGCACAAGAACAACGCCGAGCTGCTTGGCAATAGCAG
TGAGGATGAGAATGTGAGACCGCAGCAAGGGTCCTCTTCCTCGGGACTAG
GATCATCGGGAGCAGCAGGTGGATCAGGCATACTGCTCGAGGAGTTTAAC
AGCGGCAAACTGAGTCCCGGAGAGGCGAGTAATACGCTGCCCATATTCCT
CATCGAGCCGGAGAGCGTGTTCGTGGTCAAGAACCGGCCGGCGGTGCTTA
AGTGCAAGGCCTCCCACTCGCTGCAGGTGATCTTCAAGTGTAGCGGCAGT
TCGCAACCACCGCCGTCCACGCACGAAACTCACGTGGATCCGCACACGGG
GGTCAACATGGAGGAGGTCACCGCCACCATCCACCGCGACCTGGTCGACG
AGTTCTTCGGCGACGGACCCTTCAAGTGCGAGTGCCACGCGTGGTCGTCG
CGTGGCGTGGTCAAGAGTCAGGCGGCCACTGTGCACATTGCTTATATTCG
CAAGTCCTTCAACCAGTCGCCCACCTCGCTGCGCCTGGAGCTGGGCAGTC
GGGCGGAACTGCGCTGCGAACCACCCGGCGGTTTTCCCCGAACCGAAGCT
CACCTGGCACAAAACAACGCGGTCATCACGGCGGACAGCGAGCCGGGGAT
CACCGTTTTCGGCCCGGCACACTCATCTTTCGCCAGGTGGCCCTGCAGCA
TATGGCCAACTATTAGCTGCAGTGCGCGAGATATCGCTGGCAGACCGCGT
TCTCCGATTCGGCGGTGCTCATCGTTTATGTCAACGGTGGCTGGAGCACC
TGGAAGTTCATGGCGCGAATGCATGTGTTGCGGGCAAGCCCAGCCAGGGA
AGGAAGCCGTTCGCCGCACTCTTCACCAATTCCGAAGTCCATTGAATGGG
GGCCTGAAGTGTCGG
FMO10675.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:36:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| unc-5-RB | 5235 | CG8166-RB | 871..1954 | 8..1103 | 4955 | 97.7 | Plus |
| unc-5-RA | 5033 | CG8166-RA | 669..1752 | 8..1103 | 4955 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:36:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15357027..15357712 | 8..693 | 3415 | 99.9 | Plus |
| 2R | 25286936 | 2R | 15358009..15358290 | 694..980 | 990 | 94.4 | Plus |
| 2R | 25286936 | 2R | 15358578..15358653 | 980..1057 | 260 | 94.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:36:53 has no hits.
FMO10675.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:51 Download gff for
FMO10675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| unc-5-RA | 640..1741 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:25:30 Download gff for
FMO10675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| unc-5-RA | 661..1762 | 1..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:40 Download gff for
FMO10675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| unc-5-RA | 661..1762 | 1..1113 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:40 Download gff for
FMO10675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15358009..15358290 | 694..980 | 95 | -> | Plus |
| 2R | 15357019..15357712 | 1..693 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:25:30 Download gff for
FMO10675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11244524..11245217 | 1..693 | 99 | -> | Plus |
| arm_2R | 11245514..11245795 | 694..980 | 95 | -> | Plus |
