FMO10677.5prime Sequence
998 bp (818 high quality bases) assembled on 2011-06-24
> FMO10677.5prime
CAGTCGACATGTCGCGTATGTCGCATATGCTAGCACTACTACTGGTACTA
ATTGCCAGTAGTCAGGCGCTCGAGGGCGTGGTCCAGCCCACTTGCAATCT
AAAGGACAATTGCAATTTGGGCGATAATCTTCTGGCCGGAACAAATTCCG
CATCCGATGCTGGCGATGTGTCTGCCGATAAGCTGGAGAGCAAAATTGCA
TCGATTTTCGAGGATAAGGTCAACTATAGTCTAAAGTTATTTGCGGACGA
TGCGACGACAACAATCCTGGAATATCAAACGGCCAATTTGAGTCAGTTGC
ATGCGGTAACGCCTGGAAATTACACGATACACCAGATGGAACAGGCGGAG
GATGATGACGACCAAGTGGAGGAGGATGAAAGTTTTCTATTTGTACAACA
TTGGCAAGCGTTTTCTGGCCATTACGCAACCCTTCGACGCGGCCAGAAAT
CCGGATGCCTCGACTTTGTGTCGCCGGCAGATGCATCAGTTTCTGAACGC
CTTGGACAACTTCGATCTGTGGGCTCTGAAGATGCACGACTCCAGTGGCA
AATTGAACTCGGGCATTCTGAATGGCAACATCAATCAACCCGGCGATTTT
GACCAGTGCCTGGGCATTCAGCAACGCATGAATCAAGATCAGGATGCGGG
CCAGGATCAGGATGGTGACTCCATCATTCGGGGCCAGTATTGTTTTGGCC
TATGCCCAGCCCGTTTTGCCACACAATTCGAAGCGATTGAAGAGTTTCTT
CAGCTGATCCAATCACATGGACCTTTTAAGAGCGAGTTCAACGACCCCGG
GCCACCGAGTGCCCCGCTACTCCTTGATCAACTGGGGCCTCTGTGTGCCC
TCCGCTGCTCCGCCGCGATGTGGAGTACAGTGGTGGCCGAGTATCTGGGC
CAACCAGACGCTTCACGGTCATCACTTCAATGTGCCGTGGAGCCGATGGT
GCAGTGGCGCGATCACGCTGGATCGAACACCCTTGGCGGTGCTCTTCT
FMO10677.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:37:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| drd-RA | 3280 | CG33968-RA | 281..1218 | 9..944 | 4340 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:37:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15126033..15126406 | 9..382 | 1870 | 100 | Plus |
| X | 23542271 | X | 15133271..15133533 | 533..795 | 1205 | 98.9 | Plus |
| X | 23542271 | X | 15131571..15131716 | 387..532 | 730 | 100 | Plus |
| X | 23542271 | X | 15134765..15134866 | 800..900 | 365 | 97.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:37:02 has no hits.
FMO10677.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:52 Download gff for
FMO10677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| drd-RA | 275..1216 | 1..944 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:26:35 Download gff for
FMO10677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| drd-RA | 277..1218 | 1..944 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:44 Download gff for
FMO10677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| drd-RA | 277..1218 | 1..944 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:44 Download gff for
FMO10677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15126029..15126412 | 1..385 | 97 | -> | Plus |
| X | 15131570..15131716 | 386..532 | 99 | -> | Plus |
| X | 15133271..15133533 | 533..795 | 98 | -> | Plus |
| X | 15134762..15134913 | 796..944 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:26:35 Download gff for
FMO10677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15020062..15020445 | 1..385 | 97 | -> | Plus |
| arm_X | 15025603..15025749 | 386..532 | 99 | -> | Plus |
| arm_X | 15027304..15027566 | 533..795 | 98 | -> | Plus |
| arm_X | 15028795..15028946 | 796..944 | 93 | | Plus |
