FMO10679.5prime Sequence
1144 bp (950 high quality bases) assembled on 2011-06-24
> FMO10679.5prime
CAGTCGACATGTCGATTACCCTAGAGGAGGAAATCTTCGGCTTGGCCGTG
AATCCGTTCACCAAGTCGCCCGAAATGGTGCGCCGGTACACGCTTAAGAA
CTCCAAGGGCATGACCGTGTCAGTGATCCAACTGGGGGCCATCATCCAGA
GCGTCTGCTTGCCGGACGCCTACAAGAAGGTGGATGATGTGTGCCTCGGC
TTCGACGACATCGCCAGTTACTTGGCCAACAAGGGAGCCTACATCGGTGG
GACCCTCGGACGAGTGGCCAACCGGGTGGCCAATGGCGAGTATACGTTTA
ACGACACGAAAGTCTCGGTGACAAAAAATATCCAGGACAAATTCCAGCTG
CACGGTGGCTTCATTGGATTCGATAGCGTCATATGGGAGGTGGTACAGAA
GTCGGCCGAGGGAGTGATATTTCGGCACGTATCGCCACACGGACACGAGG
GCTATCCGGGCAAACTGACGTGCCTCATCACCTACCAGCTGGACAACGAG
AATCGGTTGTGGGTCAGGTACGAGGCCACCACAGATCGCTCCACCATGGT
CAACCTCTCGAGCCATGCCTACTTCAACTTGGCGGGGCACGGATCCGGAG
CGAAGGGTCTTTCAGAGCACACGGTGGAGATTGCGTCCGATCAGATCGTG
GACACGGACGAGCTGCAGATTCCACGGGGAAGCTAGTCGACGTCAAGGAC
ACCGTCTTTGATCTCATGCTGCCGGTTCTGATGCGCGACCGACTCATGCA
GTTCGAAAATCGTCAGATCAAGGGCTACGACAACTGCTTCGTGGTCAACG
GAGGGCGTGTGCAAAAAAGTGTAGCCAAGGTGGCCAAGATCGTGGCATCC
GCCCATCCTGCCGGGTACTGGAGGTTTGGACCGACAAGCCCGGTTATGCA
GTTCTACACCGCGAACCATCTTACCTCGATAGTGGGCAAAAATTGCACTA
AAATATGAGATGCACGGCTCCTTTTGGGGTGGAAGACGGAAAAAGTTCCC
CGATGCAATGACCAACCCGGAGTTCCCTTCGATCAGCCCTCGAGCCGAAC
CAAAAGTATTCGGCACCGATGTTCCTCTACTTGTTTTAGGTCGAGGAGTC
CCTGGAAGTGCTTGTTTGTCACACAACGATTCACACAGCATTTC
FMO10679.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32444-RA | 1280 | CG32444-RA | 36..1132 | 5..1112 | 5025 | 97.7 | Plus |
| CG4988-RA | 1218 | CG4988-RA | 155..981 | 87..915 | 840 | 74 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:37:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21638144..21638912 | 333..1112 | 3080 | 96.5 | Plus |
| 3L | 28110227 | 3L | 21636982..21637313 | 5..336 | 1645 | 99.7 | Plus |
| 2L | 23513712 | 2L | 11695305..11695631 | 348..674 | 480 | 76.5 | Plus |
| 2L | 23513712 | 2L | 11694958..11695153 | 87..282 | 440 | 81.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:37:10 has no hits.
FMO10679.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:54 Download gff for
FMO10679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32444-RA | 33..1149 | 1..1133 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:27:40 Download gff for
FMO10679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32444-RA | 33..1149 | 1..1133 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:48 Download gff for
FMO10679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32444-RA | 33..1149 | 1..1133 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:48 Download gff for
FMO10679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21636979..21637312 | 1..335 | 99 | -> | Plus |
| 3L | 21638147..21638929 | 336..1133 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:27:40 Download gff for
FMO10679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21630079..21630412 | 1..335 | 99 | -> | Plus |
| arm_3L | 21631247..21632029 | 336..1133 | 96 | | Plus |
