FMO10682.5prime Sequence
1133 bp (1010 high quality bases) assembled on 2011-06-24
> FMO10682.5prime
CAGTCGACATGGACGGCAGCAGTCGTAGTTCCATGGATACCGACATGGAA
ATACAGAAGTTGCCAGTGAAACGGCACTTGCCGGTGACCAAAGGCCATGG
GTGTGTTAAAAATAAGTGCCGCCGAAATCTAGACGAGATGTCCATCCAAC
AGTTTTCCGACTCATCCTCTCAGTCGGAGGGCGATGGCGAGGAGGACTCC
AATGATGCCGACGACGAGGAGTATCAGCAGCCCGAGTGGACGGGTCGCAA
AAGGCCGCCGCTGGTCTATCTCGAGTTGGGCGATAAAATCATTATCGTTA
GGAACGAGCCACAGCCCAACGTCAAGCTGGAAGACGATGTGCAACTTAAA
ACGAAGATGCACAAATTTTTGGGTCTGATACCATCACGCCGCAAGCTCTA
CAATCCTGCGGTGGTTTACGATATGAAGCCGGAGGATATTGAGAATATCA
ATTGTGTCGTCAATTCATCCCATGCGTCCGCAGAGCCATTTACTCCATCA
GCCGAGCAACCAATTCGTCCGAAAACAATGATGACATCCACTTGGTCAAA
GCTTAATTTGTCGAATATCGATGAACCGACCCCTGAGGAGAGCCAGGCTA
AAAGCAAAAATGACTTTGAGCTCTGGTCCATTGCATTCTCCTTTGATCAG
TGCACCCCGGACTTGCATAAGGAGCCCATTGATCTTATCGATTTACCCAA
CGAAGAGCAGTTGGCCGCCAACTGCCGACGTCACAAGAGCAGTGTGCCAT
GCCTGGAGCGGCATCCAAAGTTCTACGGATTCGTTCGTTCGCTCAGCCCT
TCGATTTCGCTCAATATGTGCCATCCACTGGCGCTCACCTACAGGCAAAC
AATTTCAAAATCTGCATGTGGCACTGGCCAAAGTGCTGTTCAACATCTTC
AACCACGCGATCTTCCACTGTGGCCTTTCAGTGCCCATTGTTGAGCACGC
ATGCACACGCGATGCCACATGCCAGCTGACCGTCGATGCCCATGGTAGCG
CAGAGCCAGATTCTCCTTCTGCGGAGTATAAGACTACGCGAGCTATTCGG
CTGCTGCTGCAAGAGAATGTTGCCACGTGTGCCATTTTGTGTTCAATCCG
GAGTTGATCACGCGACATTTGCCGCAAGTGCTA
FMO10682.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:37:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11322-RB | 1765 | CG11322-RB | 99..1231 | 9..1130 | 4965 | 96.9 | Plus |
| CG2694-RD | 3066 | CG2694-RD | 1705..1980 | 669..942 | 545 | 81.4 | Plus |
| CG2694-RB | 3152 | CG2694-RB | 1791..2066 | 669..942 | 545 | 81.4 | Plus |
| CG2694-RD | 3066 | CG2694-RD | 1279..1427 | 258..406 | 325 | 81.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6758501..6759530 | 1031..9 | 4640 | 98.3 | Minus |
| X | 23542271 | X | 2716233..2716508 | 669..942 | 470 | 80.5 | Plus |
| X | 23542271 | X | 2715807..2715955 | 258..406 | 325 | 81.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:37:17 has no hits.
FMO10682.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:55 Download gff for
FMO10682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11322-RB | 96..1231 | 6..1130 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:28:44 Download gff for
FMO10682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11322-RB | 96..1231 | 6..1130 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:51 Download gff for
FMO10682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11322-RB | 96..1231 | 6..1130 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:51 Download gff for
FMO10682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6758398..6759533 | 6..1130 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:28:44 Download gff for
FMO10682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6758398..6759533 | 6..1130 | 96 | | Minus |
