FMO10685.5prime Sequence
339 bp (327 high quality bases) assembled on 2011-06-24
> FMO10685.5prime
TACCGCGCAGCCAAGTGCAGAATTTCTACAATTACCAGCAGCAGCGGGAG
CAGCGCGAGCAGCAGCCCCAAATCCAGATATCGGCCATCCACCATTCGCG
TGGATCCGTTGGCGGAGGAGGCGGATCCAACTCATCCAACGCTGCCACCG
ACTACTCCACGAGCAGCGGTGGCAAGCGGGAGCGGGACCGCTCCTCCGCC
AGCGACTACAGCAGCTCGTCCAGCAAGCAGAGCTCCGCTGCAGCGGCCAA
TGCAGCAGCAGCTGCCGCCGCCGTCGCTGCCCTCCAATACTCCCCGCAGT
TCCTCCAGGCCCAGCTGGCGCTACTCCAGCAGCAGTCGA
FMO10685.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:37:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18292-RB | 1831 | CG18292-RB | 260..598 | 1..339 | 1680 | 99.7 | Plus |
| CG18292-RA | 1831 | CG18292-RA | 260..598 | 1..339 | 1680 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11138118..11138456 | 1..339 | 1680 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-26 23:37:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 885..954 | 240..308 | 104 | 62.9 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7030..7101 | 270..201 | 102 | 63.9 | Minus |
FMO10685.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:56 Download gff for
FMO10685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18292-RA | 237..574 | 1..338 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:29:43 Download gff for
FMO10685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18292-RA | 260..597 | 1..338 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:53 Download gff for
FMO10685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18292-RA | 260..597 | 1..338 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:53 Download gff for
FMO10685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11138118..11138455 | 1..338 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:29:43 Download gff for
FMO10685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11032151..11032488 | 1..338 | 99 | | Plus |
