FMO10692.5prime Sequence
1037 bp (887 high quality bases) assembled on 2011-06-24
> FMO10692.5prime
CACTCGACATGATATTCGCTCGGTGGACGCCCAAACAAATGCTCACAATG
TTTGGCTTGGGAGCTGGGCTGCTGGGCCTTGTGATTGTGATCGGTGTGCT
CAACAGCGGCGTGTCCTCGAAGGACCTCGACTGGAAGGAGGCGTCCAGAT
CGAAGTGCTTCAAGACGCGTCCCAACACCACGCACTCCACCTTGGAACTG
GTGCACATTGTGTTCAGACATGGCATTCGCACCCCAGTGGACACTTATCC
CAAGGATCCCTACTTAAACGACGGCTTCAAGCCAACGGGCTGGGGACATG
TGACTAACTCAGGAAAACGGGAACTCTTCGAAATGGGTCGCTGGCTGAAT
CGAAGATACGGCGAGTTTATGGGTCCTTATTACAGACCGGATCGCCTGCA
TGCCCAAGCCACTGCCTCTCCGAGGGCCATGATGTCTTTGCAAACAACAC
TGGCCAGCATGTTTGAGCCGCGGGGAACCCCCATGGAGTGGAATAAGCAC
CTCAACTGGCAGCCCATCCCAATCGTGTCGGAACCCCTGGATGAGGACTC
GCTCCTGCTGGTGCGCACTCCCTGTCCCCGCTACTTTGAAGCCTTGGAAG
AGGTCTTTAAGAGACCGGAAGTTATCGCTGAAACCGAGCCCTACGAACAA
ATGTTCCCGCGAGCTGACAAATCTGACTGGGAAAGGCGATCCAGAGTGCC
GAGGATATCAATTTCCCTATACATAACCCTCCTCGCCGAACAGGAATTCG
GCTACAGTTGCCCGACTGGGCCAAGGACTACCTCCCCGATCGCATGCAGT
TTCTGGCCGAGCAGAGTTTACGTCTACAATGCGTACACCCCCGAGATGCA
GAAGATCAATGCGGACCGTTTCTGAAGAGGATGTACAAGGAGATGTTCGC
CAAGAAGGCCGGGTAGCCTGAGCCCAATGATCGCGGTATGTTCATATACA
CCGGGCCACGACTGGACGTCGCAATATTCCTGATGGCCTTGGGTGTTGTG
GAAGCGCCCAGAATGCAACGGTTCGCGGTGATGGGCC
FMO10692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:37:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9452-RA | 1652 | CG9452-RA | 249..1269 | 9..1034 | 4675 | 97.9 | Plus |
| CG9449-RH | 2589 | CG9449-RH | 1675..1840 | 714..878 | 205 | 77.5 | Plus |
| CG9449-RG | 1939 | CG9449-RG | 1242..1407 | 714..878 | 205 | 77.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:37:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19501796..19502274 | 1034..551 | 1630 | 94.7 | Minus |
| 3L | 28110227 | 3L | 19503323..19503622 | 308..9 | 1485 | 99.7 | Minus |
| 3L | 28110227 | 3L | 19502326..19502484 | 551..393 | 795 | 100 | Minus |
| 3L | 28110227 | 3L | 19502542..19502625 | 392..309 | 420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:37:44 has no hits.
FMO10692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:41:59 Download gff for
FMO10692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9452-RA | 242..1271 | 1..1037 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:31:45 Download gff for
FMO10692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9452-RA | 242..1271 | 1..1037 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:01 Download gff for
FMO10692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9452-RA | 242..1271 | 1..1037 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:01 Download gff for
FMO10692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19503323..19503629 | 1..308 | 98 | | Minus |
| 3L | 19501794..19502273 | 552..1037 | 95 | <- | Minus |
| 3L | 19502326..19502484 | 393..551 | 100 | <- | Minus |
| 3L | 19502542..19502625 | 309..392 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:31:45 Download gff for
FMO10692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19494894..19495373 | 552..1037 | 95 | <- | Minus |
| arm_3L | 19495426..19495584 | 393..551 | 100 | <- | Minus |
| arm_3L | 19495642..19495725 | 309..392 | 100 | <- | Minus |
| arm_3L | 19496423..19496729 | 1..308 | 98 | | Minus |
