FMO10707.5prime Sequence
1121 bp (984 high quality bases) assembled on 2011-11-14
> FMO10707.5prime
CAGTCGACATGGAGATCCTGCTGGAACTAAACCTAAAGCAGAAGCTGGCC
ACCCGACTAGGCACCATCCTGCTGGCCACAGTGATCTTCGGCGCCTTTTG
CTGGGACAACGCGTTGGCCAGTCTAACACTGGGAGCAGTGGTGGCTCTCC
TGCTCAGAAATCCCACCTTCGTCTTTGCCTTGGTAATGACCGCGTCCAGG
GACCTAAAGGCTTTCCAGCGATTCGTGGCCCTCAACATCTACCTGCTAAG
AAAGGATCGCGGCGGATTCACTGTGGCCCGCTGTTTCCAGGACCAGGCCA
GACGCCGCCCCAAAAAGACATGCTTCGTGATGGACGATCGCCATTTAAGC
TTTGCAGAGGCTCTGGAGTTTAGCCAAAAGATAGCTGGATATTTTAGCGA
TCGCGGCCTGGAGAGGGGCGACTGTGTGGCCCTACTAATGGAAACGCGTC
TGGAGTATCCCTGCATTTGGTTGGGTCTCTCCCAGCTCGGGGTAATCACA
GCCCTTATTAACTCCAATCTGCGCGGGGAGTCTCTGCTGCACTCCATCAA
AGTGGCCAATGCCAAGGCCCTAATTGTGGGCAGTGAACTCCTGGATGTGC
TGGTATCACTTAGGGAGAAGGAGCAGTTGGACGAGGTGCCCATCTATCAG
TACACAGATGACGAGGTTCGCGGGGTGGCTGGACATGATCTTTTGCCAGG
AGCTGTGGACTTGGTTACTGCTCTAAAGACCCAAAAGAAACTGGAGCTAC
CGAGTGCTGTCTGTCCTGTAGAAGCTCGTTCCAAATTGCTCTACGTTTAC
ACCTCTGGAACTACGGGCTTGCCCAAGCAGCTGTGATCACCAACCTGCGG
TTCCTCTTCATGTCTGCAGGATCCTACTACATGCTCAGATGTCCAGCGAC
GATGTGGTGTACGATCCCCTTCCCCTCTACCAACACCGCTGGTGATTGTG
GGAGTGGGCAATGCATCCTCATGGATCCACCGTTGTGCTGCCGCAAAAGT
TCTTCGGCCAGGACTTCTGCCTTGACCTTGCGATCCGCCAACACTGCCAC
TGTTGGCCCAATAAATCGGGGGAGCTGTGTCGCTATCTTCGCCACCCTCC
TACTCCCCCCGATTCGCGAAG
FMO10707.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:22:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3394-RB | 2357 | CG3394-RB | 252..1352 | 9..1109 | 4965 | 97.5 | Plus |
CG3394-RA | 2308 | CG3394-RA | 203..1303 | 9..1109 | 4965 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:21:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24295908..24296730 | 209..1026 | 3610 | 97.6 | Plus |
2R | 25286936 | 2R | 24295650..24295850 | 9..209 | 1005 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:22:01 has no hits.
FMO10707.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:04 Download gff for
FMO10707.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3394-RB | 126..1091 | 1..964 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:56 Download gff for
FMO10707.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3394-RA | 196..1161 | 1..964 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:02 Download gff for
FMO10707.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3394-RA | 196..1161 | 1..964 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:02 Download gff for
FMO10707.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24295643..24295849 | 1..208 | 98 | -> | Plus |
2R | 24295908..24296666 | 209..964 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:56 Download gff for
FMO10707.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20183166..20183372 | 1..208 | 98 | -> | Plus |
arm_2R | 20183431..20184189 | 209..964 | 99 | == | Plus |