Clone FMO10709 Report

Search the DGRC for FMO10709

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:107
Well:9
Vector:pMK33-CFH-BD
Associated Gene/TranscripteIF3-S8-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10709.5prime Sequence

1107 bp (998 high quality bases) assembled on 2011-11-14

> FMO10709.5prime
CAGTCGACATGTCGCGTTTCTTTGCCAACGGGTCCGAATCGGAGTCCGAG
TCCAGCGAGGAGGAGATCCAAGCGACCAACTTCAACAAAGCCAGCGCCTT
CCAATTCAGCGACGATGAGGAGGAGGTCAAGCGCGTGGTCCGCTCCACGA
AGGAGAAGCGTTACGAGAACCTCACCAGCATCATCAAAACCATTCGCAAC
CACAAGAAAATCAAGGATATTCCCAATACCCTGAGCAGCTTCGAGGATCT
GACGCGCGCCTACCAGAAGGCACTGCCGGTCATCTCAAAGGAGGAGAACG
GCATTACGCCGCGATTTTACATTCGCTGCCTGGCCGAGCTGGAGGACTTC
ATCAACGAGGTGTGGGAGGATCGCGAGGGCAGGAAAAACCTTTCCAAGAA
CAACTCCAAGTCGCTGGGCACTTTGCGCCAGAAGGTACGCAAGTACATCA
AGGACTTCGAGGACGATCTGTCGCGTTTCCGTGAAGCACCCGACCAGGAG
AGCGAGGCCGAGGACGAGGTGGTTGCCCTGGAGAGCGACGGCGGCGATGC
TGGTGATGACAGCGACGCCGGAGTGAAGCCTACAGAAGCGGTTCCGAAAG
CTGTGAAGTCCGCGCCGGCAAAGGCTGCGCCCGCCGATGATGACGATTCC
GATGACTCCATTGATTGGGACTCGGACTCTGAATCGGAGACCGAGTCCTC
TGACGATGAGAACCAGTATCAGAACATGCGCGAGCGATTCTTGAAGCGTA
CTACCGAAAAGGAGGAAAAGGATGATGACAAGAGGAAGGACAAGCGTAAG
GAGCAGAAGACCAAGATCCGCAGCGCGCCGAGGACGATGAAGATGGCGAG
TGGGAGACTGTGGTCAAGGGTCATGTAGTAGAGAAGCCCAAGATGTTCGA
AAAGGACGCAGAGATCGATGTTCCCCTAGTGCTGGCCAAGCTGTTGGGAA
ATTTTGTCGGCTCGCGGCAGAAGCGGCACGATCGCCGTCTGCAGATCGAT
CTGCTTTTCGAGTTGAGGGACCTCTCTGATCACCACAACCATGGGAACCG
CCGTCTCCGGTGAAGATTCTTTTACATCTCTCTCGCTAATCTCGAATTCA
CCCGAGA

FMO10709.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:22:17
Subject Length Description Subject Range Query Range Score Percent Strand
eIF3-S8-RB 3275 CG4954-RB 175..1238 9..1073 5105 99 Plus
eIF3-S8-RA 3143 CG4954-RA 94..1157 9..1073 5105 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17666222..17667192 102..1073 4515 98.8 Plus
2R 25286936 2R 17666067..17666159 9..101 465 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:22:16 has no hits.

FMO10709.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:05 Download gff for FMO10709.5prime
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 175..1251 9..1085 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:05 Download gff for FMO10709.5prime
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 94..1170 9..1085 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:10 Download gff for FMO10709.5prime
Subject Subject Range Query Range Percent Splice Strand
eIF3-S8-RA 94..1170 9..1085 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:10 Download gff for FMO10709.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17666067..17666159 9..101 100 -> Plus
2R 17666222..17667196 102..1075 98 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:05 Download gff for FMO10709.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13553572..13553664 9..101 100 -> Plus
arm_2R 13553727..13554701 102..1075 98 <- Plus