FMO10709.5prime Sequence
1107 bp (998 high quality bases) assembled on 2011-11-14
> FMO10709.5prime
CAGTCGACATGTCGCGTTTCTTTGCCAACGGGTCCGAATCGGAGTCCGAG
TCCAGCGAGGAGGAGATCCAAGCGACCAACTTCAACAAAGCCAGCGCCTT
CCAATTCAGCGACGATGAGGAGGAGGTCAAGCGCGTGGTCCGCTCCACGA
AGGAGAAGCGTTACGAGAACCTCACCAGCATCATCAAAACCATTCGCAAC
CACAAGAAAATCAAGGATATTCCCAATACCCTGAGCAGCTTCGAGGATCT
GACGCGCGCCTACCAGAAGGCACTGCCGGTCATCTCAAAGGAGGAGAACG
GCATTACGCCGCGATTTTACATTCGCTGCCTGGCCGAGCTGGAGGACTTC
ATCAACGAGGTGTGGGAGGATCGCGAGGGCAGGAAAAACCTTTCCAAGAA
CAACTCCAAGTCGCTGGGCACTTTGCGCCAGAAGGTACGCAAGTACATCA
AGGACTTCGAGGACGATCTGTCGCGTTTCCGTGAAGCACCCGACCAGGAG
AGCGAGGCCGAGGACGAGGTGGTTGCCCTGGAGAGCGACGGCGGCGATGC
TGGTGATGACAGCGACGCCGGAGTGAAGCCTACAGAAGCGGTTCCGAAAG
CTGTGAAGTCCGCGCCGGCAAAGGCTGCGCCCGCCGATGATGACGATTCC
GATGACTCCATTGATTGGGACTCGGACTCTGAATCGGAGACCGAGTCCTC
TGACGATGAGAACCAGTATCAGAACATGCGCGAGCGATTCTTGAAGCGTA
CTACCGAAAAGGAGGAAAAGGATGATGACAAGAGGAAGGACAAGCGTAAG
GAGCAGAAGACCAAGATCCGCAGCGCGCCGAGGACGATGAAGATGGCGAG
TGGGAGACTGTGGTCAAGGGTCATGTAGTAGAGAAGCCCAAGATGTTCGA
AAAGGACGCAGAGATCGATGTTCCCCTAGTGCTGGCCAAGCTGTTGGGAA
ATTTTGTCGGCTCGCGGCAGAAGCGGCACGATCGCCGTCTGCAGATCGAT
CTGCTTTTCGAGTTGAGGGACCTCTCTGATCACCACAACCATGGGAACCG
CCGTCTCCGGTGAAGATTCTTTTACATCTCTCTCGCTAATCTCGAATTCA
CCCGAGA
FMO10709.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:22:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF3-S8-RB | 3275 | CG4954-RB | 175..1238 | 9..1073 | 5105 | 99 | Plus |
eIF3-S8-RA | 3143 | CG4954-RA | 94..1157 | 9..1073 | 5105 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:22:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17666222..17667192 | 102..1073 | 4515 | 98.8 | Plus |
2R | 25286936 | 2R | 17666067..17666159 | 9..101 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:22:16 has no hits.
FMO10709.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:05 Download gff for
FMO10709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF3-S8-RA | 175..1251 | 9..1085 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:05 Download gff for
FMO10709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF3-S8-RA | 94..1170 | 9..1085 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:10 Download gff for
FMO10709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF3-S8-RA | 94..1170 | 9..1085 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:10 Download gff for
FMO10709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17666067..17666159 | 9..101 | 100 | -> | Plus |
2R | 17666222..17667196 | 102..1075 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:05 Download gff for
FMO10709.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13553572..13553664 | 9..101 | 100 | -> | Plus |
arm_2R | 13553727..13554701 | 102..1075 | 98 | <- | Plus |