FMO10710.5prime Sequence
1148 bp (1025 high quality bases) assembled on 2011-11-14
> FMO10710.5prime
CAGTCGACATGTTCTATACATTTAGTTGGATTTCGAAGCATTACAAGAAA
ATGAGAAAATTCGAGTCAGCTGAGTGGGAAAATGTCACACAACTGAACTT
GGCCGAGGCGCAGGTATTTACTGGAGACGAAGGGAACCTTCAGTCTATGG
AGAAAATTTACTTGAAATTCTTTGAAAAGGATGATCTCATCAGTCGAATG
GCCTTGTTCAATCAGTTTCACCTCTACACCTGCAAGACGCCGCAATCGCC
GCAGCAATTTCTTTACCACTTTTATGTGAAGTACATCATTCAAGAACTGA
AGGCTCACGCGTTAGTAGAGTGGTCCTGGCTGTTGCTCAGGAAGTTTGGG
CGAGGGGGATCCATCGAGGAGGAGCAGGCAAGCCGGGCAGCTTACAAGCG
ACGGACAGAGGGCACACTACCGAAGATCAAAGTCCTGATGAGCCAAGCAG
ATCGCTCCGTGTGGCGCTGTGATCCCCAGGAACACCAGTCAGGGGTCACC
CATGAGGAGGTCACCCGCCTTCTGCAGGGTTACGTGGAGAATGAGGTGGA
CCTTAACAGCGATGGAGCGTGCAATCAGGAATGTGGTTACTACAAATTAG
CCAAAAACGAGGGTTGCTTCGATAATAAGTTCTGTTCCGAGCAGCCAAAA
TGTACGGGCGGAGTTCATGATTGTCGCTTTGTGGAGTCGAACATGAAGAT
TTGTCAGGCGGAAAAGAACTCTAGCAGGCGGTACGAGTTCATAAAGTACG
AAAGTGGCCTTGTTCATGGCAATGAGAAACCTTGTGCCACGTGGTTGAAC
AGTGCAAAGAGTTGGAATCGGTGGCTTTTCATGGAATGCAGCTACTGCCT
TTGCTTGTGCGATGATCAGAGTCCTCAATCGGATCGGTACTTCAATCTGC
GTCCTGTGATCGCCGATGTTAAAAATAACAGGGTCGTGGGTGGGGCTCCG
ATTTGTGAAGAGGAATCGCATTTTTCACTTGCCAGGTCCAGAAGTGTACT
TTCTGCCACTTGGAGACATCAACGGGACACCTCTTCGTGGAAGCCCGGTG
GATCGTACTTCATATCCGACCAGGATGTGTCTGAAAACGCTGACTTACTA
ACTTACTACGAAGCAATCCATGATTGGGGTGATCTGAATGCAAATTAT
FMO10710.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:20:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31664-RB | 1971 | CG31664-RB | 254..1392 | 9..1141 | 5165 | 97.6 | Plus |
| CG31664-RC | 2075 | CG31664-RC | 254..1395 | 9..1141 | 5125 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:20:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1825185..1825904 | 932..213 | 3600 | 100 | Minus |
| 2L | 23513712 | 2L | 1825987..1826193 | 215..9 | 1035 | 100 | Minus |
| 2L | 23513712 | 2L | 1824970..1825137 | 1095..928 | 475 | 88.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:20:57 has no hits.
FMO10710.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:59 Download gff for
FMO10710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31664-RB | 123..1276 | 1..1148 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:27 Download gff for
FMO10710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31664-RB | 245..1398 | 1..1148 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:36 Download gff for
FMO10710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31664-RB | 245..1398 | 1..1148 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:36 Download gff for
FMO10710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1825186..1825901 | 216..931 | 100 | <- | Minus |
| 2L | 1825987..1826200 | 1..215 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:27 Download gff for
FMO10710.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1825186..1825901 | 216..931 | 100 | <- | Minus |
| arm_2L | 1825987..1826200 | 1..215 | 98 | | Minus |
