Clone FMO10717 Report

Search the DGRC for FMO10717

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:107
Well:17
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG42326-RD
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10717.5prime Sequence

1120 bp (997 high quality bases) assembled on 2011-11-14

> FMO10717.5prime
CAGTCGACATGGGTAGTATCTATGGGCTTCTGCCGCTGCTTCTGCTTTTG
TGTCGCCTCCACGACGGCGGATCAAAGTTCGTTAGTCCTACGCGACACAC
CGATCTCAGCAGCACCATTATCATTGTGGAGGACGCCAAAGCCTGTTTCC
GACGAGTCCTGGCCGGAAAACGGATAGCACCACACTTCGTGCGCCGCTCC
ATATCCTGCGAGCGGGTGGAGGAGTGCATGCGGGAGTGTGGTCGGGAGCG
GCGTTTCATGTGCGAAGGCTTCAACTATAGGCTGGATCCCTCGGGTCACG
GGCAAGGCGACTGCGAGCTGGTCGAGATGCCACTGGCCCAGATGGACCTG
TACTCCAGTCCGGATCGACGTGATGCCAATTTGCTGAGGCATCCCGACTA
CGATTACTACGAGAGGGACCGCAATGCGCCGAGCAGCTGTCGCCGCAGCG
CTTGCCAGGATTGTTCCAAGGGTCCGGTTAGCAGTCAGCCTGTTTACTTC
AAGCCGAGTGGGGGAGCAGGGGGATATGGCGACCGTGACCGGGATCGGGA
CAGAGACAGGGATCACTATCGTCCGCATAGCAACACGGCCGTGGACCATT
ATCGTGGTCCATCTGGTCCTCCGGGCTCCTCCTCTTACGAACACCGACCT
CCCTACTCCTCCGAGTTCCATGGATCGCACAGCTCATCCTCCTCGGCATC
CTCCTATGAATTCTCCTCGCATGGCTCGGGATCTAGCTCGGGTTCCAGTT
CCGGATACTTTGGTCACACCCCACCCAGTAGCTATGGCGGCGACCATCCC
TACGTGGATCGCCATGACTCTCCGCATTATCGCCCCCGGAAGACCCGGAT
CGTTGGGAAACTTTTGCCGAGTAGCTCCCGGTTACGATAGCTCCGCGTAC
AGGCCGCCCACGTCTGGAAACGGATCACATCGACAAGTTACCGTCCACCG
TATCGTCCTGGGTCGGATTATCTGTCCTATCGAACCACCAAGTCGCCCGG
TCGCATACTACCTCGATGGCGATGGAAGCAGACCTCCAGGGTTCTCTGGG
GTCCACAAAGCAAATAAATTTGTTTCCCTATTGATATGGCGCGAGACAGA
TGGGGACTCAACGGTGTTGA

FMO10717.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG42326-RD 3400 CG42326-RD 235..1339 9..1116 4830 96.8 Plus
CG42326-RE 5244 CG42326-RE 2208..3183 138..1116 4185 96.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:23:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8576496..8577389 1040..140 3870 97.1 Minus
2R 25286936 2R 8578125..8578257 141..9 665 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:23:12 has no hits.

FMO10717.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:09 Download gff for FMO10717.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42326-RD 230..1272 9..1058 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:30 Download gff for FMO10717.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42326-RD 235..1277 9..1058 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:27 Download gff for FMO10717.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42326-RD 235..1277 9..1058 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:27 Download gff for FMO10717.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8576525..8577387 142..1011 98 <- Minus
2R 8578125..8578257 9..141 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:30 Download gff for FMO10717.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4464030..4464892 142..1011 98 <- Minus
arm_2R 4465630..4465762 9..141 100   Minus