FMO10719.5prime Sequence
262 bp (262 high quality bases) assembled on 2011-11-14
> FMO10719.5prime
CAGTCGACATGGTGCATCTGTATCAACGACGTCGCAACCGCGAACAGGCT
GTGAAACAATTCATTGATCTCTGCAACAATCTAGGTGCTAACTGCAGCAC
GACGACAGCCACATCCCCGTCAACTTCCTCCTCCTCAGCCAGCAGCACGC
AGAACTTAATAGCAGTAGTGCCGCCACAGTTGCAGCAGCTGCAGGTGCAA
TTACCGGCGCCAGGTGGAGGAGGAGGAGCAGGTGCAGGAGGAGGAGGTGG
TGGAGGTGGGGG
FMO10719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:23:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0232-RB | 2969 | CG32697-RB | 176..430 | 8..262 | 1275 | 100 | Plus |
| l(1)G0232-RA | 3046 | CG32697-RA | 291..507 | 46..262 | 1085 | 100 | Plus |
| l(1)G0232-RG | 5668 | CG32697-RG | 487..702 | 47..262 | 1080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:23:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9644153..9644370 | 262..45 | 1090 | 100 | Minus |
| X | 23542271 | X | 9645710..9645750 | 48..8 | 205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:23:27 has no hits.
FMO10719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:10 Download gff for
FMO10719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0232-RB | 167..430 | 1..262 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:38 Download gff for
FMO10719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0232-RB | 167..430 | 1..262 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:34 Download gff for
FMO10719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0232-RB | 167..430 | 1..262 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:34 Download gff for
FMO10719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9644153..9644367 | 48..262 | 100 | <- | Minus |
| X | 9645711..9645755 | 1..47 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:38 Download gff for
FMO10719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9538186..9538400 | 48..262 | 100 | <- | Minus |
| arm_X | 9539744..9539788 | 1..47 | 93 | | Minus |
