FMO10729.5prime Sequence
1052 bp (994 high quality bases) assembled on 2011-11-14
> FMO10729.5prime
CAGTCGACATGTCCAGCGACGACAATAGTAGTGATAGCAATTCGTCCAGC
GATGAAAGGCAAAGGAAACGGAAGCTTAAGAAGCACAGCAAAGATGTGGA
CAAGTCCAAAAAGAAGAAGTCGAAAAAGCACAAGAAAGAAAAGCGTCGCC
ACAAGGAGAAGAAACGCAGCAAGCATGAGGAGGAGCCACCTGTGCCTTAC
ACGCAACCTCCACATTTAATTAATGCATCTCCGCCAGATGTGGCTACAAA
CAACGAAGATTCCTTTGGTCCCGCTTTACCGCCGCATTTAAGGAAGACCC
AGCAGCCGGAACTCCCTGAGCAAAGCCAACCAGCCCCACAACCGCAGGCC
ATGATAGGACCCGTCCTGCCCAGCAATTTGACCCGGGAAAAGTCTCCTAC
TAAGGAAGCGGAAGCTGAGGACGATGATGACCTAGCTGGCACCTTTGGTC
CTCTGCCAAATGCCAGTCAAGTGGCTCTGGAGGAACGTGCTTTGGCACTT
AAACTGGCAGCTCTGGAGGGCGGGGGATTGGGTACATCTACAGACCAAGA
TGTCCGCGAAGAGTGGATGCTTGAGCTGCCAGATGTGGGACTGAAGAGCG
GCCTTGCCGCCCTGAGCAATATGAAGCGCACTTTCTATCAGGGAAAAGAG
CGACCCGACTTTAGCGATCGATCATCCTGGACGAAGACCCCGCAGAGTGA
AGCGGATGCTGCTGCATCGGGCCCAAAGTCGCTCAGTTCGAAGGAACTCG
AGCAAATGGCACATGTCAAGTACGAACAGCAGCGGGATGACGAGCAGAGA
GCATGGCCAAGAGGCACAAAAAGAAGCACAAGCGAGAGGAGTCCCTAGTG
AGCTACATCAAAAAAAGCTTACGAAAGAGCAGAGAGAAAAGGAAAAGACT
GGCTGCATCGGGTTCCAAGCCAGACGAAGACCTTTTAGTAGGGATGTGAC
TTGAAACTTAACAGATCGACAGATCAGACCAGCAGATTGTAGACAGCCAG
ATTTGACCCCAGTTCTCCAGGTCAGCTAAGTATCTGCAGCTTTCTAGAAC
AT
FMO10729.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:24:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33332-RA | 1315 | CG33332-RA | 78..1125 | 8..1036 | 4740 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:24:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14887849..14888735 | 8..892 | 4305 | 99.5 | Plus |
| 3R | 32079331 | 3R | 14888803..14888870 | 898..963 | 240 | 97.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:24:48 has no hits.
FMO10729.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:15 Download gff for
FMO10729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33332-RA | 57..1110 | 8..1042 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:15 Download gff for
FMO10729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33332-RA | 57..1110 | 8..1042 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:08 Download gff for
FMO10729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33332-RA | 78..1131 | 8..1042 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:21:08 Download gff for
FMO10729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14887844..14888734 | 1..891 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:15 Download gff for
FMO10729.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10713566..10714456 | 1..891 | 99 | -> | Plus |
