FMO10731.5prime Sequence
1110 bp (968 high quality bases) assembled on 2011-11-14
> FMO10731.5prime
CAGTCGACATGAAATTTAAACAAATGGACTTTGTGACGACAACTGGGGAG
GGAAGTTTTCTGCGAAACAAGATTCGTGCATATGCCAAGGATCACCGTGT
TGAGTGCCGCATAAAGGCGAAAGACTCATTGCGCATTGGACTTGGACAGG
TTAAGCAGGAAGTGGCGGCTCTTGAGATGGGCACCAAGGACGTCATTGGA
ATGGCCAGCAGGATCAAGCGTCGCAAGCACGCCACCTCCGAGGATCTGTG
CCGCTTGTCGCTGGGGTTCCTCCAGAGCAATGACAACATCAATGCATTCG
CAGCTATTCCTGGCGCCATTCAGGTTCTGGTTAAGGAGCTAACTGGACCT
CACATTCAACGACAGACAGATGCCGTGGAGTGCTTGTGTAATCTTTCCTT
GGGCGAGGCCCATGTCTCCGAAAAGATTGTCACTTTGGCGGGCAGCTACA
TGGTCACCTACCTTGATGGCAAGGCCGAACGCCTCAAGCGCAGTTGCCTG
TGGACACTGGCCAACGTTCTGGGCACATGCGACAAGGCCGGCAGCGTATT
GCTGCAAATGCAAATAGTACCCAAGCTGTGGAGGCTCTACATCGAGCCCA
ATGGCTGCCAAGAAGATGCGGCCATCTGCCTCTCCCTGGTGGCCACCCGC
TGCCCGCAGCATGTGAGTGACGAGGATCGAAGGTACATTGGCCAGAATCT
GCCTGAGAAGCTCCACGGCCAGCCTGCCAGCGAGTACTTCATGTACATAG
TGCACCAACTGGAAATAGTGACACAGGAGCACAAGTTAGATGCTCAACAG
GCCGAATGCCTGGTGCGTTTCTTTGAAGCCACCTTAGCATCGCCAGCCGA
CCGGCTGTGCCTAATCTACGCCGTGCGTGTAATGACCAATCTGGTAGCCC
TAGTGACACAAGTCTAATATTCGCACTGGCAGACCCGCAGATCTTTGTGC
AAACCCTAAACCAGCTCTTTCGCTTTGGGGAGATCCAGATCCTCAACCTG
GACGGATGCGCCTTGCTCAGGACTGTCTTGCACTTGAAGGAACAGATTCA
ACTGGTTACTGAATAGCCTTGCAATACCGCAGCCAGCTTCTAGACCATTC
GTTTGCGCGC
FMO10731.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:25:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15443-RB | 1731 | CG15443-RB | 487..1552 | 8..1074 | 4935 | 98.2 | Plus |
| CG15443-RA | 1278 | CG15443-RA | 34..1099 | 8..1074 | 4935 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:25:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4461939..4462564 | 969..345 | 3035 | 99.4 | Minus |
| 2L | 23513712 | 2L | 4462623..4462961 | 346..8 | 1695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:25:06 has no hits.
FMO10731.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:16 Download gff for
FMO10731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15443-RA | 29..1099 | 1..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:23 Download gff for
FMO10731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15443-RA | 29..1099 | 1..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:15 Download gff for
FMO10731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15443-RA | 29..1099 | 1..1074 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:21:15 Download gff for
FMO10731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4461836..4462563 | 346..1074 | 97 | <- | Minus |
| 2L | 4462624..4462965 | 1..345 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:23 Download gff for
FMO10731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4461836..4462563 | 346..1074 | 97 | <- | Minus |
| arm_2L | 4462624..4462965 | 1..345 | 98 | | Minus |
