FMO10732.5prime Sequence
1112 bp (1008 high quality bases) assembled on 2011-11-14
> FMO10732.5prime
CAGTCGACATGCATTTTTACAAGTACATTTTACTCGGTATTTGCGGCTTA
ACGGTAAGCGATGCACTTGCCGTGTACGATGCCTCCGGACGCTTTAATCT
CAGTGCCAGTTGCCCGGATTCCTTCTGCAGCTTAAGTGATCGGCCAGTGG
CATACTCTGCGACTCCGGCTCTTCAGCTCCGGGAATTGCACTTGAGAAAC
TGCAGCCGGCAATCGATCACATGGCTGGTTCTGCAACTTACACCTGGTCT
TCGCACCTTGGTTATCCGCAACTGTGCCACCTACCACATTAGCAAGGAGA
GTCTGAGGCCAGTGGAAAATCTAACCTCCCTGCAGATGCAGGGCACTAGT
CTTGGCGTCCTCCGGGATCAGATCTTTAATGCAGTGCCTCGTTTGGAGAT
CCTGCAGCTAAGTCAGAACTTCATCCACACGGTTCACGTAGCCGCCTTCC
AGGGCTTATCCAAACTAAGATTACTGGGTCTGCAAGGGAATGCGATAGCT
GAAATCCTGTCTAGCACACTTGATCCTCTGATGGAGCTAGTCCATCTGGA
CTTAAGCAGGAATGAGCTCACAACTTTGCCACAAAACATCTTTGCTAAAA
ATAAGAAGCTACAAACCCTGTTACTCAATGGCAACCCATTGAGAATTTTA
ATGCCAGATGTACTAGGCTCTCTACCCAATCTTCGACTGCTCGACTTGGG
ACATGCTGCTGAATTGGAGGTGATGACGCTAAACCTTACCAATGTGCAGA
ATTTAGTTCTGGAGGGGAGTAGTCTTAGCAGTTTAGTCATCAACGGAGGC
TTTATCAACTGCAGGCGGGGAACAATGAGCTGAATCATCTGCAAGTGGGA
AACAGAGCTCTGTGATTGAGATGGATTTGCATGGTATTTGTTGAATGGAA
ATGATACGGCCGCCCTTCTCAGGGATGTGAATCTGCAAAGGCTGGATCCT
GTCCAAAATAGGATCGAGCATTGCCCCAGCATGGAAGCCGATTGATGCTT
CCGGCACCAGGAGCTGTTTGATTTGCCAGTTTGAAGTTTCTGATTGGCGA
CCATTCAGTGTCCCTGCCTCGATCGCATCTTCATCGCGTCTAGCTATGGA
TGATCATCTGAT
FMO10732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18249-RC | 2022 | CG18249-RC | 51..1115 | 7..1059 | 4910 | 98.2 | Plus |
| CG18249-RB | 1983 | CG18249-RB | 51..1115 | 7..1059 | 4910 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8220196..8221242 | 7..1043 | 4635 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:25:15 has no hits.
FMO10732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:17 Download gff for
FMO10732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18249-RC | 51..1120 | 1..1059 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:27 Download gff for
FMO10732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18249-RB | 46..1115 | 1..1059 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:18 Download gff for
FMO10732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18249-RB | 46..1115 | 1..1059 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:21:18 Download gff for
FMO10732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8220191..8221260 | 1..1059 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:27 Download gff for
FMO10732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4045913..4046982 | 1..1059 | 97 | | Plus |
