FMO10733.5prime Sequence
1114 bp (1015 high quality bases) assembled on 2011-11-14
> FMO10733.5prime
CAGTCGACATGGTTGACAACAGCACTAGCAACAACTCCTCGGTTCTGGGC
TTGCCCAGCAGTGGACATGTTAGCAACGGCTCCGGTAGCTCGGCACAACT
TGGGGCGGGAAATCCGCACGGTAACCAGGCCAACGGAGCGTCCGGCGGCG
TTGGCTCAATGAGCGGATCAGCTGTGGGCGCTGGAGCTACGGGAATGACC
GCCGATCTCTTGGCAAGCGGCGGTGCAGGAGCACAAGGCGGTGCGGATCG
CTTGGACGCGTCCAGCGACAGTGCTGTCAGTTCGATGGGCTCCGAGCGAG
TGCCGTCCCTCTCCGACGGCGAGTGGGGTGAGGGCAGTGACTCCGCCCAG
GATTACCATCAGGGCAAGTACGGAGGCCCCTACGACTTCAGCTACAACAA
TAATTCACGGCTTAGCACCGCCACACGTCAGCCGCCGGTGGCGCAGAAGA
AGCATCAGCTGTACGGCAAGAGGGATCCCCATAAGCAGACGCCATCGGCT
TTGCCACCAACAGCTCCACCAGCAGCCGCGACTGCAGTCCAATCGCAGAG
TATCAAGTACGAGTACGATGCTGGGTACGCCTCCTCGGGAATGGCCAGCG
GTGGAATCAGTGAGCCAGGAGCGATGGGACCCGCTCTATCCAAGGACTAT
CATCATCATCAGCCTTACGGCATGGGAGCCAGCGGCAGCGCCTTTTCCGG
CGACTATACAGTACGACCATCGCCAAGACTTCGCAGGATTTGGTGCAACT
AAATCATACCTACTCGCTACCCCAGGGAAGTGGGATCCCTTCCCAGACCC
CAGGCACGCGATAAGAAGCCCCTGGTCGCCACTAAAACCGCATCGAAGGA
GCGAGTGCCGGCACAGCAGCAGTGTTGGCGGAACAGCAGCACTTGGAGGA
GGAGCATCTGACACGCGATGAAAGCGGGGCTCGATCCCTGAACATACCCA
TTTCAGGTGCCGGACATCATTAACCTGGCCCATGGGACGAGTTCAACGAA
GCGGCTTGTCGAGTACGACCTTACCGAGACCCAGTTGTCGCCTGAATTCC
CGGACATTCGTTGGCGGTGAAGAACCAGGGTCCTGCAGATTGGCAGGGAC
GCCAAATGGACAGA
FMO10733.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:25:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cnc-RN | 4746 | CG43286-RN | 2112..3167 | 8..1066 | 4815 | 97.8 | Plus |
| cnc-RM | 4737 | CG43286-RM | 2103..3158 | 8..1066 | 4815 | 97.8 | Plus |
| cnc-RP | 4261 | CG43286-RP | 795..1850 | 8..1066 | 4815 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:25:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23188086..23189119 | 1041..8 | 4500 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:25:24 has no hits.
FMO10733.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:18 Download gff for
FMO10733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cnc-RD | 98..1159 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:30 Download gff for
FMO10733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cnc-RP | 789..1850 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:21 Download gff for
FMO10733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cnc-RP | 789..1850 | 1..1066 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:21:21 Download gff for
FMO10733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23188086..23189125 | 1..1041 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:30 Download gff for
FMO10733.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19013808..19014847 | 1..1041 | 98 | | Minus |
