Clone FMO10735 Report

Search the DGRC for FMO10735

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:107
Well:35
Vector:pMK33-CFH-BD
Associated Gene/TranscriptEig71Ej-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10735.5prime Sequence

320 bp (320 high quality bases) assembled on 2011-11-14

> FMO10735.5prime
CAGTCGACATGCGGTATCTGTGCGTTTTTTCCTTAACACTTATCCTTTGC
TGCCTTTCAATAAAGGCTCAGAGCTTAAATTGCACCAGGCTTCGAGAAAA
TTGTCGTCCTTGCACCCGCCGCTTGGTGGATCCTATTAACGACCTGGAAT
TCATTAATAGCGATTGTAGGGAGAAACTTAGAGGACGTTGGATTTGGCGG
GATGTAAGGCGTTGTGATATGCAAATTGTTGCGTGCGAAAATCATGAAAC
CCGACTGGATTGCGAGAATGTGGCTAGACTAACAGGCATGAGACGGATTC
GTGCAAGCTTTCTAGACCAT

FMO10735.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:24:08
Subject Length Description Subject Range Query Range Score Percent Strand
Eig71Ej-RA 403 CG7588-RA 13..306 9..302 1470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:24:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15660772..15661003 240..9 1160 100 Minus
3L 28110227 3L 15660646..15660707 302..241 310 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:24:06 has no hits.

FMO10735.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:12 Download gff for FMO10735.5prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ej-RA 13..306 9..302 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:57 Download gff for FMO10735.5prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ej-RA 13..306 9..302 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:49 Download gff for FMO10735.5prime
Subject Subject Range Query Range Percent Splice Strand
Eig71Ej-RA 13..306 9..302 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:49 Download gff for FMO10735.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15660646..15660707 241..302 100 <- Minus
3L 15660772..15661003 9..240 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:57 Download gff for FMO10735.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15653746..15653807 241..302 100 <- Minus
arm_3L 15653872..15654103 9..240 100   Minus