Clone FMO10739 Report

Search the DGRC for FMO10739

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:107
Well:39
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCpr47Ec-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10739.5prime Sequence

419 bp (419 high quality bases) assembled on 2011-11-14

> FMO10739.5prime
CAGTCGACATGTGCAAGATCCTTCCTCTTTTCGTCCTGGCGGTCATGGTG
GCCTGTGGTCAAGCTCTTCCCGTAGATCCCGAACGTGAACCCGTGGCTAT
CCTGAAGTCCGAGATCATCAAGACAGAGGAGGGCTACACCAGCGCCTACG
TGGGAGCAGATGGTATATCTCGCAACGAGGAGGCTTTTTTGGTGGACAAG
GGTACCGACGAGGAGGCTCTGGAGGTGAAGGGATCCTACAAGTACATAAA
CGAAGACGGCCAGGAGGTGGAGGTGTTCTATACGGCGGGAAAGAACGGAT
TTGTTCCCTACGGCAGCATTATCAATCCGGAAATCACGGCCGTTGCCGAA
GCAGCCAAGGATCTGCCAAAGGTGGAGAAGGTGGAGAAGGCGGGTAGGCC
TGCAAGCTTTCTAGACCAT

FMO10739.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:26:01
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr47Ec-RA 744 CG9077-RA 138..530 9..401 1965 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:25:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11259320..11259700 401..21 1905 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:26:00 has no hits.

FMO10739.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:21 Download gff for FMO10739.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ec-RA 1..396 9..402 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:53 Download gff for FMO10739.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ec-RA 130..530 1..401 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:37 Download gff for FMO10739.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ec-RA 130..530 1..401 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:21:37 Download gff for FMO10739.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 11259320..11259700 21..401 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:53 Download gff for FMO10739.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7146825..7147205 21..401 100 <- Minus