FMO10747.5prime Sequence
936 bp (936 high quality bases) assembled on 2011-11-14
> FMO10747.5prime
CAGTCGACATGAGCATCAGCACTTTCAACTTCCAGTTCTACAACTACAAG
CTTAGCCCGTCCTCACCGGGATTCGGCAGCACAGCCTCCCGTTCCTCGTC
CTCATGCATCAGCGAACTGGAAATGGACATTGATGAGGACATGTCCGCCC
AGCCCACCATCACCTCCACGCCCAAGCCGCGCTTTACCAGCCAACTGGCC
GTGGAACTGGCCAAAACGGAGCCGGGTAATGGCATATCCCCACTGCGACC
CAAATTGCATACGGCCCAGAAACGCTGGTCCATGGAGTTGAGGGAAAAAG
TGCTGGAAATGTCCAAGCGAAATAATGGCCAGGAGAAACCACAAACCGCA
CGACAGCAGGAACAGCGACAGCCACAGGAACAGCCACTGCAACAGGAGGA
ACTGCAGCATCAGCAGCAGGAACCCACTGTCACCGACAAAATCAACTTCT
TCAACAAGCTGACCAACACCTTTGAGTCGGGTTTCAGCAAGCTGATGCCC
CAAGCAAGCTCCACCAACAACCGCTTCATAGCCATGTTGCGCACCGCCCG
TCCTCAAAACGTTGCCACAACCACCGCCAACAGCAGCACCGCCAACAGTT
TCCTGGGCAGCGACCACAGTCTCAGTGGTTCCGTGACCGGACAAGTGCCA
CCACCCAAGCCCAAGAGACTGTCGGCCACCACCGCCCAGTTTGCCACTCC
CCATGTACCAGCCATGGGCGTGGGCAAGGGGGGCAGCCAGCGCAAGTGCT
CCCTGCGCCGCAAGCCTTCGATGGACAAGTCGAGGGCCACCATCTCCCGC
CAGAGTTCCAGTGCCTCAGTACGAAACCAGAACAACGCCATCATGGAGGA
CCTCAGTCTAGTGGTTCCCGTGAGATTGCGCATCGCGGAGTACGAGCAGC
GCATCTCGATGAGTGCTGCAAGCTTTCTAAGACCAT
FMO10747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:25:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bnk-RA | 1028 | CG1480-RA | 18..932 | 3..917 | 4530 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:25:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31193379..31194293 | 3..917 | 4530 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-27 20:25:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2549 | 344..588 | 227 | 59.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6785..6893 | 314..423 | 187 | 64.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2373..2515 | 330..471 | 172 | 58.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2397..2616 | 314..527 | 157 | 57 | Plus |
FMO10747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:19 Download gff for
FMO10747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bnk-RA | 154..1070 | 1..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:40 Download gff for
FMO10747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bnk-RA | 16..932 | 1..917 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:21:28 Download gff for
FMO10747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bnk-RA | 16..932 | 1..917 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:21:28 Download gff for
FMO10747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31193377..31194293 | 1..917 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:40 Download gff for
FMO10747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27019099..27020015 | 1..917 | 99 | | Plus |
