FMO10764.5prime Sequence
503 bp (503 high quality bases) assembled on 2011-11-14
> FMO10764.5prime
CAGTCGACATGAAAGTTATTATTTTGCTGGCTCTCTTCAGCCAGATTATC
CTGGAAATTGTTGCCTATGAGCATAAAATCGCTCACAGGAAATGTGGCGA
GAACACTTTCCCAGATTGTTATTCATATTGTAACAAAGGATGCAAGGATA
ACCCAGTCGACTGCATTCATTACTGCGAGAAAGGATGTGGATGCATCGAA
GGCTCAATAGTGAGAAACAATGGAGGATGCCGAAGAATAAAGATTTGCGA
CAAGGATGATGATTCCCTATCCGTTGAAAATAACGAGTTGGCTGAAAAAT
ACGTAACATCTTATTGGGAGGACCCGGTAAATAGTAATGAAAATGAAAAT
CAAGCCCAAACGTTAGATGGTTTGGATGAAAACAAATCGGGTGAGATAAA
AAGCATGGAACAGCCGAATGAAGTGCCGCCGGAGAGTCCTTCGGAGGATG
CTCCCAATGATCCCAAGCCACCAGTAGATGCAGTGGCAAGCTTTCTAGAC
CAT
FMO10764.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:28:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp53D-RB | 820 | CG42477-RB | 30..506 | 9..485 | 2385 | 100 | Plus |
| Sfp53D-RA | 577 | CG42477-RA | 30..506 | 9..485 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:28:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16744609..16745085 | 485..9 | 2385 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 20:28:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 1194..1225 | 330..361 | 106 | 81.2 | Plus |
FMO10764.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:36 Download gff for
FMO10764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp53D-RA | 14..507 | 1..497 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:24 Download gff for
FMO10764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp53D-RA | 14..507 | 1..497 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:50 Download gff for
FMO10764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp53D-RA | 24..517 | 1..497 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:50 Download gff for
FMO10764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16744598..16745091 | 1..497 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:24 Download gff for
FMO10764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12632103..12632596 | 1..497 | 98 | | Minus |
