FMO10767.5prime Sequence
269 bp (269 high quality bases) assembled on 2011-11-14
> FMO10767.5prime
CAGTCGACATGAAATTGTTTTTCTTAGTTATTCTGGCCTGTATGCTAATC
GGAATTGCATGGGGAGAAAACTGCAATAAGCCGTGCGGAAAATGCATCTT
GCCCACCTGCAATTATGATGGCAAATGTTACTTTGAGGGAACTAGCGCTT
GTGCTCTGGAAAATGAAAAGTGCCGACGAAAGAAGAATAATCTTGACCAA
TTCGTAAAAACCGTGTCTGGGTTCTGTGAGATGGGCGTTAAAATGTGTAA
AGCAAGCTTTCTAGACCAT
FMO10767.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:29:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp35C-RB | 280 | CG42475-RB | 29..271 | 9..251 | 1215 | 100 | Plus |
| Sfp35C-RA | 368 | CG42475-RA | 29..271 | 9..251 | 1215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:29:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15201822..15201984 | 198..36 | 815 | 100 | Minus |
| 2L | 23513712 | 2L | 15201710..15201762 | 251..199 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:29:14 has no hits.
FMO10767.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:38 Download gff for
FMO10767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp35C-RA | 24..275 | 4..257 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:30 Download gff for
FMO10767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp35C-RA | 24..275 | 4..257 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:57 Download gff for
FMO10767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp35C-RA | 24..275 | 4..257 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:57 Download gff for
FMO10767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15201706..15201762 | 199..257 | 94 | <- | Minus |
| 2L | 15201822..15201983 | 37..198 | 100 | <- | Minus |
| 2L | 15202037..15202069 | 4..36 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:30 Download gff for
FMO10767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15201706..15201762 | 199..257 | 94 | <- | Minus |
| arm_2L | 15201822..15201983 | 37..198 | 100 | <- | Minus |
| arm_2L | 15202037..15202069 | 4..36 | 91 | | Minus |
