Clone FMO10768 Report

Search the DGRC for FMO10768

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:107
Well:68
Vector:pMK33-CFH-BD
Associated Gene/TranscriptSfp77F-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10768.5prime Sequence

272 bp (272 high quality bases) assembled on 2011-11-14

> FMO10768.5prime
CAGTCGACATGAGAAAGGTCGTGTTAATTTGCTTACTAGCGAGATTTAGC
ATCGGATTTCCCCAGGCTCACATATACAAGCCACTTCTTTGTGAGGAAAC
CAATGCTAATATAACCAGATCTTCGCTTCTTGCACAATGTGTAAATCAGG
ACGAATGTTTTATAAACAGACCAGTAGGTCTATGCCCCAAACTTGAAGTT
TGCTGCGTTAAAAAACAAGATTTTAACATTGACGAGGTTGAATATATGGA
AGATGCAAGCTTTCTAGACCAT

FMO10768.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
Sfp77F-RB 1093 CG42482-RB 20..265 9..254 1230 100 Plus
Sfp77F-RA 319 CG42482-RA 20..265 9..254 1230 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20897096..20897262 254..88 835 100 Minus
3L 28110227 3L 20897320..20897398 87..9 395 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:29:22 has no hits.

FMO10768.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:38 Download gff for FMO10768.5prime
Subject Subject Range Query Range Percent Splice Strand
Sfp77F-RA 1..252 9..262 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:34 Download gff for FMO10768.5prime
Subject Subject Range Query Range Percent Splice Strand
Sfp77F-RA 20..271 9..262 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:01 Download gff for FMO10768.5prime
Subject Subject Range Query Range Percent Splice Strand
Sfp77F-RA 20..271 9..262 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:01 Download gff for FMO10768.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20897090..20897262 88..262 97 <- Minus
3L 20897320..20897398 9..87 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:34 Download gff for FMO10768.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20890190..20890362 88..262 97 <- Minus
arm_3L 20890420..20890498 9..87 100   Minus