FMO10770.5prime Sequence
440 bp (440 high quality bases) assembled on 2011-11-14
> FMO10770.5prime
CAGTCGACATGTCCGCCACCCTACGTCTTCTCTGCCTGATGGCCTGCTGC
GTCGCCCTGGCTGTGGCCAATCGCCCCAACTACGGCGGATCCGGATACGG
AGCCAGCTACGGCGATGTGGTTAAGGCCGCTGAGACCGCCGAGGCTCAGG
CTTCTGCCCTGACCAACGCTGCCGGAGCAGCTGCCTCCGCCGCCAAGCTG
GACGGTGCTGACTGGAATTCCCTCAACCGTTATGGATGGGAGCAGGGTCG
CCCACTTTTGGCCAAGCCCTACGGCCCTCTGGACCCGCTATACGCTGCTG
CTCTGCCACCACGCTCCTTCGTGGCTGAGGTCGATCCAGTCTTCAAGAAG
AGCCAATACGGCGGATCTTACGGCGAGAATGCGTACCTGAAGACCGACGC
CAAACTGGGTGTTGTGGCCATCGCAAGCTTTCTAGACCAT
FMO10770.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cp16-RA | 522 | CG6533-RA | 48..461 | 9..422 | 2070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:28:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8731991..8732321 | 9..339 | 1655 | 100 | Plus |
| 3L | 28110227 | 3L | 8732453..8732538 | 337..422 | 430 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:28:10 has no hits.
FMO10770.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:32 Download gff for
FMO10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp16-RA | 250..672 | 9..430 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:05 Download gff for
FMO10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp16-RA | 48..470 | 9..430 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:36 Download gff for
FMO10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp16-RA | 48..470 | 9..430 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:36 Download gff for
FMO10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8731991..8732321 | 9..339 | 100 | -> | Plus |
| 3L | 8732456..8732547 | 340..430 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:05 Download gff for
FMO10770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8725556..8725647 | 340..430 | 96 | | Plus |
| arm_3L | 8725091..8725421 | 9..339 | 100 | -> | Plus |
