Clone FMO10773 Report

Search the DGRC for FMO10773

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:107
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10320-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10773.5prime Sequence

356 bp (356 high quality bases) assembled on 2011-11-14

> FMO10773.5prime
CAGTCGACATGGGCGGACATCACGGCGAACCCTACACGGTGCCCCACGCA
TCGACCTACAAGGTGGAGAGTGTGCCCCAACTCGTGGAGGTGAAGGAGGC
TCTGGGCCGCCAGGGATTGAAGGATCCATGGCTGAGGAACGAAGTCTGGC
GCTATGAGCCCAAGGCCTTCGGCACCCACAGATCCCGCCTGAACACCTTC
CTTTTCCGCGGACTCGGCGTGGGATTCTGCGCTTTCCTGGCCACCGTCGC
CGTGGAGTACGCGCTGGGCATTGGCAAGGGTCAGGGCGGCCATGGACATG
GCCACGGTCACGAGGAACACGGAGATAAGGGCCACCATGCAAGCTTTCTA
GACCAT

FMO10773.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG10320-RE 405 CG10320-RE 40..369 9..338 1650 100 Plus
CG10320-RD 525 CG10320-RD 160..489 9..338 1650 100 Plus
CG10320-RC 520 CG10320-RC 155..484 9..338 1650 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21658538..21658741 135..338 1020 100 Plus
2R 25286936 2R 21658353..21658481 9..137 645 100 Plus
Blast to na_te.dros performed 2014-11-27 20:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
invader3 5484 invader3 INVADER3 5484bp 354..395 72..113 102 71.4 Plus

FMO10773.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:42 Download gff for FMO10773.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10320-RE 38..372 1..338 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:53 Download gff for FMO10773.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10320-RC 150..484 1..338 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:17 Download gff for FMO10773.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10320-RC 150..484 1..338 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:17 Download gff for FMO10773.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21658348..21658480 1..136 97 -> Plus
2R 21658540..21658741 137..338 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:53 Download gff for FMO10773.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17545853..17545985 1..136 97 -> Plus
arm_2R 17546045..17546246 137..338 100   Plus