FMO10774.5prime Sequence
305 bp (305 high quality bases) assembled on 2011-11-14
> FMO10774.5prime
CAGTCGACATGACGAAGGGTACCTCCAGCTTTGGTAAGCGCCACAATAAG
ACGCACACCCTGTGCCGTCGCTGTGGCCGCTCCTCCTACCACATCCAGAA
GTCCACTTGCGCCCAGTGCGGCTACCCCGCCGCCAAGTTGCGTTCCTACA
ACTGGTCCGTGAAGGCCAAGAGGAGGAAGACCACCGGCACCGGTCGCATG
CAGCACCTGAAGGTTGTGCGCCGCCGTTTCCGCAACGGATTCCGCGAGGG
CACCCAGGCCAAGCCCAAGAAGGCCGTGGCCAGCAAGGCAAGCTTTCTAG
ACCAT
FMO10774.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL37a-RB | 565 | CG9091-RB | 114..392 | 9..287 | 1395 | 100 | Plus |
| RpL37a-RA | 1296 | CG9091-RA | 114..392 | 9..287 | 1395 | 100 | Plus |
| RpL37b-RA | 422 | CG9873-RA | 106..338 | 9..241 | 265 | 74.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15138774..15138913 | 287..148 | 700 | 100 | Minus |
| X | 23542271 | X | 15138979..15139115 | 147..11 | 685 | 100 | Minus |
| 2R | 25286936 | 2R | 23100141..23100373 | 241..9 | 265 | 74.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:30:11 has no hits.
FMO10774.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:42 Download gff for
FMO10774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37a-RA | 129..415 | 1..287 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:58 Download gff for
FMO10774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37a-RA | 106..392 | 1..287 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:19 Download gff for
FMO10774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL37a-RA | 106..392 | 1..287 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:19 Download gff for
FMO10774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15138979..15139122 | 1..147 | 97 | | Minus |
| X | 15138774..15138913 | 148..287 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:58 Download gff for
FMO10774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15032807..15032946 | 148..287 | 100 | <- | Minus |
| arm_X | 15033012..15033155 | 1..147 | 97 | | Minus |
