FMO10776.5prime Sequence
1012 bp (999 high quality bases) assembled on 2011-11-14
> FMO10776.5prime
CAGTCGACATGCACGAGGATGATCTGAAGAGTCAGTTGACCATCGCGCGG
AACGAGATCAACAATCTCAGGCAGCAAGTGCGCAACCTGCAGCATGTGCA
GCGCAAGGACATTGAGACGATAACCCGCCTGCTGCAGGACTTCCGCTGCG
AGGGGTGTGCGAACAACAACAAAAGCGCCAAGGACAAGGTCGCCGGCGAG
AAGCAGGAGCACCAGCACCAACAGCAGACGCAGGACCAGCAGACGGGCCA
AGGTCAGAGCAATTATACCAATGGTGGGCACTGCTTGGGAGAGGACTACG
CACACTTTCGGCCCATAGGAGTGATCCGGACAGCATTCCCAGAGAAGCGG
GCCGTGCCGAGGCAGTCAATTGTGGGCAGTCGCCTGCGGGGTATCATCCA
ACTGAACGACGGTGTGTTCACCAATCCGGAGCACTCCTTGGAGGGACTAG
AGGACTTTTCCCATCTGTGGCTCATCTATCATTTTCACCGCAACAATTCC
CACCCCAAGGCCAAGGCGGATAACTTTTGCTTCTACAACGAGCACTATGA
TAGTCTTAAAGGTCTAAGTTCTTGGGCATATCAAACGCTAGATGCACATC
GCAAGGACAAGCGAGATCCCTGCTACAGCTTAGAAGAACTAGAAAAGTCT
CTCACTTATGACGACCTGTGGAACTCGGCGCAACTGCAGCTGGTACGCGA
GGGAAAGATGCACGGCTTTTTGCGCATGTACTGGGCCAAAAAGATTCTGG
AATGGACAGCGACACCGGAGCATGCGTTGGAGTACGCAATCCTGCTGAAC
GACAAGTACAGTCTGGATGGTCGCGACCCCAACGGCTATGTGGGCTGCAT
GTGGTCCATTGGCGGCGTCCATGACATGGGCTGGAAGAGCGGGCTATCTT
CGGTAAGGTTAGGTACATGAACTATCAGGGATGCCGTCGCAAATTCGATG
TAAATGCCTTTGTCATGCGATACCGCGGTAAGTGCACAAGAAGAAAGCAA
GCTTCTAGACAT
FMO10776.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18853-RA | 1157 | CG18853-RA | 133..1122 | 9..996 | 4885 | 99.7 | Plus |
CG12822-RB | 1468 | CG12822-RB | 134..641 | 9..516 | 2540 | 100 | Plus |
CG12822-RA | 1522 | CG12822-RA | 134..641 | 9..516 | 2540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7829590..7829981 | 256..647 | 1960 | 100 | Plus |
2R | 25286936 | 2R | 7826932..7827284 | 646..996 | 1650 | 99.2 | Plus |
2R | 25286936 | 2R | 7830042..7830394 | 646..996 | 1650 | 99.2 | Plus |
2R | 25286936 | 2R | 7832700..7832960 | 256..516 | 1305 | 100 | Plus |
2R | 25286936 | 2R | 7832453..7832642 | 68..257 | 950 | 100 | Plus |
2R | 25286936 | 2R | 7829343..7829532 | 68..257 | 950 | 100 | Plus |
2R | 25286936 | 2R | 7826739..7826871 | 515..647 | 665 | 100 | Plus |
2R | 25286936 | 2R | 7829194..7829256 | 9..71 | 315 | 100 | Plus |
2R | 25286936 | 2R | 7832304..7832366 | 9..71 | 315 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 20:30:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6712..6891 | 58..241 | 164 | 59.3 | Plus |
FMO10776.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:44 Download gff for
FMO10776.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18853-RA | 130..1130 | 1..1000 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:04 Download gff for
FMO10776.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18853-RA | 125..1125 | 1..1000 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:28 Download gff for
FMO10776.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18853-RA | 125..1125 | 1..1000 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:28 Download gff for
FMO10776.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7829186..7829255 | 1..70 | 95 | -> | Plus |
2R | 7829346..7829532 | 71..257 | 100 | -> | Plus |
2R | 7829592..7829981 | 258..647 | 100 | -> | Plus |
2R | 7830044..7830397 | 648..1000 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:04 Download gff for
FMO10776.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3716851..3717037 | 71..257 | 100 | -> | Plus |
arm_2R | 3716691..3716760 | 1..70 | 95 | -> | Plus |
arm_2R | 3717097..3717486 | 258..647 | 100 | -> | Plus |
arm_2R | 3717549..3717902 | 648..1000 | 98 | | Plus |