Clone FMO10778 Report

Search the DGRC for FMO10778

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:107
Well:78
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCp19-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10778.5prime Sequence

545 bp (545 high quality bases) assembled on 2011-11-14

> FMO10778.5prime
CAGTCGACATGAACAAGTTCGCTACTCTGGCAGTCATCTTCTGCGCCTGC
ATCGTGGGCAGCTGCTACGCCAACTACGGTGGCCAGCAGAGCTACGGACA
GCGATCTTACGGTCAGGATAGCTCCGCCGCCTCCGCCGCCAGCTCAGCAG
CTGCTGCTGGAGCCGAGGGTCAGCAGCGTTATGAGCGCCCCGTGGAGATC
ATCGCCGGCGGTTACCGCGGCAGCTATGCCCCCGAGATCCTGCGTCCCAT
CCAGGTCAGCGGTGGATATGGCGGTGAGCGACGTGGCTACAACGGTGGCA
ACTACCGTCGTGCCGGCTACGGACCCCGTTGGACTGTCCAGCCCGCCGGT
GCCACCCTCCTGTACCCCGGCCAGAACAACTACAAGGCTTACGTCTCGCC
CCCGGAGTACAGCAAGGTGATCCTGCCCATCCGCCCTGCTGCTCCAGTGG
CCAAGCTTTTCGTCCCAGAGAACCAGTATGGCAACCAGTACGTTAGCCAG
TACTCTGCACCCCGCAGCAGCGGCTACGCAAGCTTTCTAGACCAT

FMO10778.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
Cp19-RA 651 CG6524-RA 43..562 8..527 2600 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8730012..8730515 24..527 2520 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:30:44 has no hits.

FMO10778.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:45 Download gff for FMO10778.5prime
Subject Subject Range Query Range Percent Splice Strand
Cp19-RA 37..567 1..533 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:12 Download gff for FMO10778.5prime
Subject Subject Range Query Range Percent Splice Strand
Cp19-RA 37..567 1..533 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:35 Download gff for FMO10778.5prime
Subject Subject Range Query Range Percent Splice Strand
Cp19-RA 37..567 1..533 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:35 Download gff for FMO10778.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8730012..8730520 24..533 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:12 Download gff for FMO10778.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8723112..8723620 24..533 99   Plus