FMO10779.5prime Sequence
542 bp (542 high quality bases) assembled on 2011-11-14
> FMO10779.5prime
CAGTCGACATGATGAAGTTCATGTGCATCTGCCTCTGCGCCATCTCTGCC
GTTTCGGCCAACTCCTACGGACGTTCCCGTGGTGGATACGGTGGTGCCCC
AGTCGGTGGCTATGCCTACCAGGTGCAGCCTGCCCTGACCGTTAAGGCGA
TCGTTCCCTCATACGGTGGTGGATACGGCGGAAACCATGGAGGATATGGC
GGTGCCTACGAGTCGGTGCCTGTGCCCGTGTCCTCTGCCTACAGCGGTGC
CAATGTGGGATCTCAGTACTCCGGTTCCGGCTACGGCGGTGCCCCACCAG
TTGATGCCCAGGCCATTGCCCTCGCCAAGCTCGCCCTGGCCGCTCCCAGC
GCTGGAGCTCCTCTGGTCTGGAAGGAGGCTCCCCGCTACGCCCAGCCCGT
CTATCCCCCCACCAGCTACGTGAACCAGGAGTACGGACACAGCGAGAAGG
TGAAGGGAGGCTCCGCAGCCGCTGCTGCCAGCTCCGTGGCCGCCGGAAAG
AAGGGCTACAAGAGGCCCAGCTACGCAAGCTTTCTAGACCAT
FMO10779.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cp18-RA | 649 | CG6517-RA | 45..560 | 9..524 | 2580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8727023..8727524 | 23..524 | 2510 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:30:52 has no hits.
FMO10779.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:45 Download gff for
FMO10779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp18-RA | 35..564 | 1..529 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:18 Download gff for
FMO10779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp18-RA | 35..564 | 1..529 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:38 Download gff for
FMO10779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cp18-RA | 35..564 | 1..529 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:38 Download gff for
FMO10779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8727024..8727528 | 24..529 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:18 Download gff for
FMO10779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8720124..8720628 | 24..529 | 99 | | Plus |
