FMO10780.5prime Sequence
970 bp (970 high quality bases) assembled on 2011-11-14
> FMO10780.5prime
CAGTCGACATGAGAGTGCGACTGACTTTGCTAACGATATGCATTTACCTA
TGCGCGGCTGCAGCTGAGGATCTGGACTCCATCCATGAGATCCGCAGTGA
GGTGGAGGAGCTGATCAAAGGTACGGAGGAGCTAAACCATGGGCTGCAGA
AAGTGAAGGACGTGCAGAAGGGCATTGAAGAGAAGTTCAAGCATCAGCGC
GACGAGATCGAACTCATTGCTGGATTGGAGGTTGCCATAGCCAAGCTGGA
ATCGAACGTTCAAAGCAGCTTCCAAGCCACGGCCTCTGGAGTGGGAAATT
TGACAGCCATTGTTAACGCAATCCAGGGTCAGAATGAAAACTCTATTAGG
AATCTTACCAAAGTGGAGCTAGAAATCAGGAAAGCCCTGGAACAAGTGGC
TGCCAATCAGAACAAATACGAGCAGAACCTAAATGAAGTGGCCTCATCCG
TCAACTCGCATCTGTCGGAGATTCAGCAGCTGCTATCACAGGCCGTCATA
GGGGAACTCATCGGCTTGGACAATAAAGCGAAGGTCCTCCAGGAGCAGCA
GCGCAACATCGTGGGTCAAGTGGGATATCTGGGCGAACTTAAGGCTCTGG
CAGATCGTGCCAATCGCAAAGTCAATCAATTGGAGTGGGGTCTGGTCATT
CTCAACCGCACTCAGTCCGAGAGCCTCAACAGCATCGAGCACACTGTCCA
TGGAGTGCAGGTGGCCACCTCACAGGTCGATCATAAACTGGCTGCCCTAC
TGAACAATCAGAAGAACATTGAAAGGACGCTGGATGGCTGCAAGCACAAA
AATCCGTCACACCAGAAGCCCCACGAGATCTGGACTCACCCGGAACACGC
ACCAATTTACAAGCCAAACCAGAGGGCAATCAAGGATACGAGAACGTCTA
TGCATCCCAGAGAGCTGAATACCTATACAAACTTTGGTATGGAAAGGGCC
AGGCAAGCTTTCTAGACCAT
FMO10780.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:31:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13083-RB | 1145 | CG13083-RB | 34..982 | 8..952 | 4645 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19487523..19488378 | 8..863 | 4280 | 100 | Plus |
| 2L | 23513712 | 2L | 19488439..19488528 | 866..952 | 325 | 93.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:31:00 has no hits.
FMO10780.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:46 Download gff for
FMO10780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13083-RB | 31..989 | 1..961 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:21 Download gff for
FMO10780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13083-RB | 31..989 | 1..961 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:40 Download gff for
FMO10780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13083-RB | 31..989 | 1..961 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:40 Download gff for
FMO10780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19487520..19488377 | 1..862 | 99 | -> | Plus |
| 2L | 19488435..19488535 | 863..961 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:21 Download gff for
FMO10780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19487520..19488377 | 1..862 | 99 | -> | Plus |
| arm_2L | 19488435..19488535 | 863..961 | 92 | | Plus |
