Clone FMO10786 Report

Search the DGRC for FMO10786

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:107
Well:86
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34435-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10786.5prime Sequence

921 bp (921 high quality bases) assembled on 2011-11-14

> FMO10786.5prime
CAGTCGACATGCTCCAGAATTTCGCGTTTGAGAATCACCCCACAATCGGA
TTCTTTTCCAAGCAATCGGAGCTAATGAGAATGCTGCCCGAGATTCCCAA
GCTGCGCAACATCTTCGATCTGTTCGTGGTCAATGAATGTGACCAGGCGG
CTGGCGGAGAAGATGTGGCGGCCCCAACATGCTTGGATCTTGGCATCGGG
ATACGGATGACGGATGTGGCGGACTGCCTGCGCATCATGGGCCTGAATCC
CAGTGACGACGAGCTGCAGCAGCGACTGGAGGAGCATGTGCGTCGACGCG
AGTCGTTGGGCATGGGAATGAAGAAGATCGCACAGCGCGCCACCTTTGAG
CTGGTGCTCACGCTGTACTGCCAGCTGGCGGAGCAGGAGGTGAAGGAGAT
GGCCAAGGGATGCATCGTCGAGAATGTGCTGCGCGTGTTGCGTAGCCGCG
ATTCCGCGGGCACTGGCATGTTGCCCTACAGTCAGCTGCGCCATTTGCTG
ACCACCATGGGCAATCGATTGGACGAGACGGAGGTCTACGGCGTGCTCCA
TCGCGCTGCGGACATTAATGGCAATGTCCTCTACGAGCACCTAGTACACC
AGCTGTTCGCCACGGATCCGCTGGCCGAGGAGCGGCTGCAACAGGCGCAG
CTTTACCTGCAGGCCGTCGGACGCAATGCCATCGACATGGACATGGATAA
GCGGGACGAGTTCATCGATGCCATCCGGCGGGCGGATCCCGCGCGCTCCG
GTTTCATTGAGCCGCAGCGCCTGCTCGAGCTGCTCAATCGCAATGGGGAG
CAGTTCACCGGCGAGGAGCTGCAGCTGCTCATCCAGGGAATGGAGGATAC
ACGGTGCAAGCGGGGCATCAACTATTGTCGCTTCCTGAGTTCATTATGAA
CGAGCAAGCTTTCTAGACCAT

FMO10786.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG34435-RA 1084 CG34435-RA 73..969 9..904 4460 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:31:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5613440..5614174 904..171 3625 99.9 Minus
X 23542271 X 5614233..5614395 171..9 815 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:31:15 has no hits.

FMO10786.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:41:47 Download gff for FMO10786.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 1..900 9..908 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:28 Download gff for FMO10786.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 64..969 1..904 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:45 Download gff for FMO10786.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34435-RA 64..969 1..904 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:45 Download gff for FMO10786.5prime
Subject Subject Range Query Range Percent Splice Strand
X 5613440..5614173 172..904 99 <- Minus
X 5614233..5614404 1..171 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:28 Download gff for FMO10786.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 5507473..5508206 172..904 99 <- Minus
arm_X 5508266..5508437 1..171 98   Minus