FMO10787.5prime Sequence
583 bp (583 high quality bases) assembled on 2011-11-14
> FMO10787.5prime
CAGTCGACATGCCGCAGGCCAATCTTACGTTAAGTCCCCATGATCAGCAG
GTGCTCGATTCCATTTTCAATCCCCTCGAGCTTAGCAGCCTACAGACAAA
TAACTTAATTCCCGCTGAATCCGACCTGAAGGATGAGGAGCCGGATACCC
AGGCTATCAAAGCTTCCAGGGAACTGGAGCTAAAAGCCATCGCCTTATCC
GAAAGCGGGGAGCTTGATGGAGCACTGGAACTATTTCAACAATCATTAAA
TCTAGCCCAGAGGGCTTCCGTGCTTAATAATCGGGCACAAACTTTACGCC
TAGCCAAACGTGATGAGGAGGCCCTCGATGACCTAAACAAAGCCCTAGAA
CTGGCCAATGATCAGCAGACCCGCACCAAGTGCCATGCCCATTGTCAGCG
AGGTGTCCTTTATCGTAAACTGGATAACTTGGAGGCGGCTCGTGCTCGAT
TTCGAGGCAGCAGCCCAGTTGGGCAGTAAATTCGCCAGAGAACAGTTGGT
GGGAAATCAATCCCTATGCAGCTCTCTGCAATCAAATGCTCCGTCAGCAT
TCGATCAACTCAAAGGCAAGCTTTCTAGACCAT
FMO10787.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:20:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14105-RA | 666 | CG14105-RA | 37..591 | 8..563 | 2710 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:20:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13426327..13426637 | 318..8 | 1555 | 100 | Minus |
| 3L | 28110227 | 3L | 13426089..13426265 | 495..318 | 840 | 99.4 | Minus |
| 3L | 28110227 | 3L | 13425966..13426028 | 563..502 | 265 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:20:04 has no hits.
FMO10787.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:54 Download gff for
FMO10787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14105-RA | 29..601 | 1..573 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:01 Download gff for
FMO10787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14105-RA | 29..601 | 1..573 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:16 Download gff for
FMO10787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14105-RA | 29..601 | 1..573 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:16 Download gff for
FMO10787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13425956..13426033 | 496..573 | 92 | <- | Minus |
| 3L | 13426089..13426264 | 319..495 | 99 | <- | Minus |
| 3L | 13426327..13426642 | 1..318 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:01 Download gff for
FMO10787.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13419189..13419364 | 319..495 | 99 | <- | Minus |
| arm_3L | 13419056..13419133 | 496..573 | 92 | <- | Minus |
| arm_3L | 13419427..13419742 | 1..318 | 99 | | Minus |
