Clone FMO10791 Report

Search the DGRC for FMO10791

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:107
Well:91
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13309-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10791.5prime Sequence

713 bp (713 high quality bases) assembled on 2011-11-14

> FMO10791.5prime
CAGTCGACATGCTGCGCCTACTGATCGTTTTGGGATTTTATATCCTGGGC
TGCCGAGCAGCCTGCAATACCTGCAACGCTAATGGCGTGTCCTGTATATC
GGAAACGGAGTTTCAGTTCTGCTCCTCCGCCAGCGAACCCATCGGAAACC
TCTACACCTGCCCCACCGGTTACTACTGCACAGAGAGCACGCCCATTTGC
AGCTCCGTGGCATCTTCGGCAGGTTGTACAGGATGCAATACGTGCAGTTC
GGATAATCGTTTTGCTTGCACCGGTCGGAATACCTTTGCGCTGTGCCTAG
GTACTTCTACACCCAGTACATCGATTGGCGGAAGCTGTGGCACTAATTAT
GTATGCAACGTGGGGAACGCCAATATCTGTGGCAGTCCTGCCACATACGC
AGTATCCTGTTCCACATCAAGTACGTCAGACTGCGATACTACGGCCATCA
AAAATGCCACCGAGTATTGTCAAACCATTCAAACAGCCGGAAAATATCCT
TATGGCGGAGATACCTCAACCACCTGCAGGCAATATGTGAACTGTTACAC
CGCTGCTGGTATTTTCTATGGAAATGTGTACACTTGTCCAGGACTCACCT
ACTTCGATAGTACCTCCAAACTTTGCACCACCCAAACGCAGGCCAGATGC
TCGGATACAGTGTCTTGTTTGACTCTCAATAACCGATTATTGCCGGCAAG
CTTTCTAGACCAT

FMO10791.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:20:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG13309-RA 800 CG13309-RA 17..703 9..695 3435 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:20:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8810411..8810934 9..532 2620 100 Plus
3L 28110227 3L 8811006..8811168 533..695 815 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:20:28 has no hits.

FMO10791.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:56 Download gff for FMO10791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13309-RA 8..710 1..703 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:11 Download gff for FMO10791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13309-RA 8..710 1..703 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:25 Download gff for FMO10791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13309-RA 8..710 1..703 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:25 Download gff for FMO10791.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8810402..8810934 1..532 99 -> Plus
3L 8811006..8811175 533..703 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:11 Download gff for FMO10791.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8803502..8804034 1..532 99 -> Plus
arm_3L 8804106..8804275 533..703 97   Plus