Clone FMO10792 Report

Search the DGRC for FMO10792

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:107
Well:92
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18343-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10792.5prime Sequence

323 bp (323 high quality bases) assembled on 2011-11-14

> FMO10792.5prime
CAGTCGACATGGAGAAAAGCTGCAGTATTGGCAACGGACGGGAGCAATAC
GGCTGGGGACATGGCGAACAATGCGGCACGCAGTTCCTTGAATGTGTCTA
CAGGAACGCGTCCATGTACTCTGTTCTGGGCGATCTGATCACATACGTGG
TGTTCCTGGGGGCTACGTGCTACGCAATACTTTTCGGCTTCCGACTGTTG
CTGTCCTGCGTGCGAATCGTCCTCAAAGTGGTTATCGCCCTCTTCGTCAT
CCGATTGCTGCTAGCTTTGGGCTCCGTCGACATCACATCTGTTAGCTATT
CCGGGGCAAGCTTTCTAGACCAT

FMO10792.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG18343-RB 630 CG18343-RB 162..460 7..305 1495 100 Plus
CG18343-RA 449 CG18343-RA 70..368 7..305 1495 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12138856..12139154 7..305 1495 100 Plus
Blast to na_te.dros performed 2014-11-27 20:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
diver 6112 diver Tinker 6112bp 2607..2674 170..107 105 66.2 Minus

FMO10792.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:57 Download gff for FMO10792.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18343-RA 47..358 1..310 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:15 Download gff for FMO10792.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18343-RA 62..373 1..310 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:28 Download gff for FMO10792.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18343-RA 62..373 1..310 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:28 Download gff for FMO10792.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12138848..12139159 1..310 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:15 Download gff for FMO10792.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8026353..8026664 1..310 98   Plus