FMO10793.5prime Sequence
849 bp (849 high quality bases) assembled on 2011-11-14
> FMO10793.5prime
CAGTCGACATGAAACGTCTTCTATTTCTCTTTCTGCTTGCTGGTATTTTA
ATAAACAATCATGCCCTGCAGCACAACGAGACCATTGACTTGAAAAAGTT
GGCCAAAATAGTGCTGCCTCCGGCTTATCAAACCCGTGTTATTGGTGGTC
GGGTGACCACCAACGCGAAATTGGGCGGATACCTGGTGGCAATGCGGTAC
TTCAATAATTTCATCTGCGGCGGTACTTTAATCCATGAGCTCATTGTCCT
CACGGCGGCGCACTGTTTTGAGGACCGAGCAGAAAAGGAAGCCTGGAGCG
TGGATGGTGGCATCTCCAGACTCAGCGAAAAAGGCATTCGTCGTCAAGTT
AAGCGCTTCATTAAGTCGGCCCAGTTTAAAATGGTCACCATGAACATGGA
CGTGGCTGTGGTGCTACTGAATCGACCGATGGTTGGAAAAAACATCGGAA
CTCTATCCTTGTGCAGTACGGCCTTGACTCCGGGACAGACAATGGACGTA
TCCGGCTGGGGAATGACAAATCCGGATGACGAGGGTCCGGGGCATATGCT
CCGCACGGTATCAGTACCTGTGATTGAAAAAAGAATATGCCGCGAAGCCT
ATCGGGAATCAGTCTCCATATCGGATAGCATGTTTTGTGCCTCAGTTTTG
GGAAAAAAGGATGCTTGCACCTACGACTCAGGAGGTCCCTTGGTTTACGA
AAAACAAGTCTGCGGCATTGTGTCCTTTGGGATCGGATGTGCGAGCAGGC
GTTATCCCGGTGTCTATACGGATGTTCATTACGTAAAGCCATTTATTGTA
AAAGGCATCAAGCTTTGCTCTCCCGTTCCAGGGCAAGCTTTCTAGACAT
FMO10793.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:20:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sems-RA | 883 | CG10586-RA | 17..846 | 4..832 | 4110 | 99.8 | Plus |
CG11037-RA | 913 | CG11037-RA | 705..868 | 657..819 | 315 | 80.6 | Plus |
CG10588-RB | 3727 | CG10588-RB | 3510..3673 | 819..657 | 315 | 80.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:20:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20956126..20956734 | 612..4 | 3030 | 99.8 | Minus |
3L | 28110227 | 3L | 20955792..20956015 | 832..610 | 1070 | 99.6 | Minus |
3L | 28110227 | 3L | 20960467..20960606 | 796..657 | 295 | 80.7 | Minus |
3L | 28110227 | 3L | 20961623..20961765 | 772..630 | 280 | 79.7 | Minus |
Blast to na_te.dros performed 2014-11-27 20:20:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tabor | 7345 | Tabor TABOR 7345bp | 1844..1873 | 44..15 | 114 | 86.7 | Minus |
G4 | 3856 | G4 G4_DM 3856bp | 2264..2311 | 53..6 | 113 | 75.5 | Minus |
FMO10793.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:57 Download gff for
FMO10793.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10586-RA | 16..851 | 1..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:20 Download gff for
FMO10793.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sems-RA | 16..851 | 1..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:19:30 Download gff for
FMO10793.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sems-RA | 16..851 | 1..839 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:19:30 Download gff for
FMO10793.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20955787..20956012 | 613..839 | 98 | <- | Minus |
3L | 20956126..20956735 | 1..612 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:20 Download gff for
FMO10793.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20948887..20949112 | 613..839 | 98 | <- | Minus |
arm_3L | 20949226..20949835 | 1..612 | 99 | | Minus |