Clone FMO10802 Report

Search the DGRC for FMO10802

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:2
Vector:pMK33-CFH-BD
Associated Gene/TranscriptRpS6-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10802.5prime Sequence

769 bp (769 high quality bases) assembled on 2011-11-17

> FMO10802.5prime
CAGTCGACATGAAGCTCAACGTTTCCTATCCCGCGACGGGATGCCAAAAG
CTATTCGAAGTGGTCGACGAGCACAAGCTGCGCGTCTTCTACGAGAAGCG
TATGGGACAGGTTGTGGAGGCCGATATCCTCGGTGACGAGTGGAAGGGCT
ACCAGCTGCGCATCGCCGGCGGCAACGACAAGCAGGGATTCCCCATGAAG
CAGGGTGTCTTGACCCACGGCCGTGTGCGTCTGCTCCTGAAGAAGGGACA
CTCCTGCTACCGTCCACGCCGCACTGGCGAGCGTAAGCGCAAGTCTGTGC
GTGGATGCATCGTGGACGCCAACATGTCTGTGCTGGCTCTGGTCGTCTTG
AAGAAGGGTGAGAAGGACATTCCCGGTCTCACCGACACCACCATCCCACG
TCGCCTGGGACCCAAGCGTGCTAGCAAGATCCGCAAGCTCTACAACTTGA
GCAAGGAAGATGATGTGCGTCGCTTCGTTGTGCGTCGCCCTTTGCCCGCC
AAGGACAACAAGAAGGCCACCTCCAAGGCCCCCAAAATTCAGCGCCTGAT
CACCCCCGTTGTGCTGCAGCGCAAGCACCGTCGCATTGCGCTGAAGAAGA
AGCGCCAGATCGCTTCCAAGGAGGCTTCCGCCGACTACGCCAAGCTGTTG
GTGCAGCGCAAGAAGGAGTCCAAGGCCAAGCGCGAGGAGGCCAAGCGCCG
CCGTTCTGCCTCCATTCGCGAGTCCAAGAGCTCTGTCTCCAGCGACAAGA
AGCAAGCTTTCTAGACCAT

FMO10802.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:32:08
Subject Length Description Subject Range Query Range Score Percent Strand
RpS6-RB 960 CG10944-RB 84..827 9..752 3720 100 Plus
RpS6-RA 1195 CG10944-RA 323..1062 13..752 3700 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:32:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7899757..7900290 752..219 2670 100 Minus
X 23542271 X 7900802..7901009 220..13 1040 100 Minus
X 23542271 X 7897401..7897490 684..595 270 86.7 Minus
X 23542271 X 7898591..7898680 684..595 270 86.7 Minus
X 23542271 X 7897603..7897725 356..234 195 77.2 Minus
X 23542271 X 7898793..7898915 356..234 195 77.2 Minus
Blast to na_te.dros performed on 2014-11-27 20:32:06 has no hits.

FMO10802.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:13 Download gff for FMO10802.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS6-RB 74..828 1..755 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:52 Download gff for FMO10802.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS6-RB 76..830 1..755 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:04 Download gff for FMO10802.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS6-RB 76..830 1..755 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:04 Download gff for FMO10802.5prime
Subject Subject Range Query Range Percent Splice Strand
X 7899754..7900289 220..755 99 <- Minus
X 7900803..7901009 13..219 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:52 Download gff for FMO10802.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7793787..7794322 220..755 99 <- Minus
arm_X 7794836..7795042 13..219 100   Minus