FMO10802.5prime Sequence
769 bp (769 high quality bases) assembled on 2011-11-17
> FMO10802.5prime
CAGTCGACATGAAGCTCAACGTTTCCTATCCCGCGACGGGATGCCAAAAG
CTATTCGAAGTGGTCGACGAGCACAAGCTGCGCGTCTTCTACGAGAAGCG
TATGGGACAGGTTGTGGAGGCCGATATCCTCGGTGACGAGTGGAAGGGCT
ACCAGCTGCGCATCGCCGGCGGCAACGACAAGCAGGGATTCCCCATGAAG
CAGGGTGTCTTGACCCACGGCCGTGTGCGTCTGCTCCTGAAGAAGGGACA
CTCCTGCTACCGTCCACGCCGCACTGGCGAGCGTAAGCGCAAGTCTGTGC
GTGGATGCATCGTGGACGCCAACATGTCTGTGCTGGCTCTGGTCGTCTTG
AAGAAGGGTGAGAAGGACATTCCCGGTCTCACCGACACCACCATCCCACG
TCGCCTGGGACCCAAGCGTGCTAGCAAGATCCGCAAGCTCTACAACTTGA
GCAAGGAAGATGATGTGCGTCGCTTCGTTGTGCGTCGCCCTTTGCCCGCC
AAGGACAACAAGAAGGCCACCTCCAAGGCCCCCAAAATTCAGCGCCTGAT
CACCCCCGTTGTGCTGCAGCGCAAGCACCGTCGCATTGCGCTGAAGAAGA
AGCGCCAGATCGCTTCCAAGGAGGCTTCCGCCGACTACGCCAAGCTGTTG
GTGCAGCGCAAGAAGGAGTCCAAGGCCAAGCGCGAGGAGGCCAAGCGCCG
CCGTTCTGCCTCCATTCGCGAGTCCAAGAGCTCTGTCTCCAGCGACAAGA
AGCAAGCTTTCTAGACCAT
FMO10802.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:32:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS6-RB | 960 | CG10944-RB | 84..827 | 9..752 | 3720 | 100 | Plus |
RpS6-RA | 1195 | CG10944-RA | 323..1062 | 13..752 | 3700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:32:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7899757..7900290 | 752..219 | 2670 | 100 | Minus |
X | 23542271 | X | 7900802..7901009 | 220..13 | 1040 | 100 | Minus |
X | 23542271 | X | 7897401..7897490 | 684..595 | 270 | 86.7 | Minus |
X | 23542271 | X | 7898591..7898680 | 684..595 | 270 | 86.7 | Minus |
X | 23542271 | X | 7897603..7897725 | 356..234 | 195 | 77.2 | Minus |
X | 23542271 | X | 7898793..7898915 | 356..234 | 195 | 77.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:32:06 has no hits.
FMO10802.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:13 Download gff for
FMO10802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS6-RB | 74..828 | 1..755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:52 Download gff for
FMO10802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS6-RB | 76..830 | 1..755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:04 Download gff for
FMO10802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS6-RB | 76..830 | 1..755 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:04 Download gff for
FMO10802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7899754..7900289 | 220..755 | 99 | <- | Minus |
X | 7900803..7901009 | 13..219 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:52 Download gff for
FMO10802.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7793787..7794322 | 220..755 | 99 | <- | Minus |
arm_X | 7794836..7795042 | 13..219 | 100 | | Minus |