FMO10806.5prime Sequence
779 bp (779 high quality bases) assembled on 2011-11-17
> FMO10806.5prime
CAGTCGACATGTTCATCGAAAGCTTCCTGCTGCTCCTGGCGCTAGACTTC
CTGTCCGCAGGACAAGTAAACCGATGGGAACAACGTATCATCGGCGGAGA
ACCCATTGGAATCGAACAGGTTCCCTGGCAGGTGTCTTTGCAATATTTTG
GCGACCATGTGTGCGGCGGCTCCATTTACAGCGAAAATATCATCGTTACT
GCGGCCCATTGTTTTTTTGATGAGGAAGGCAATCGGCTAGATGACCAAGG
ATATCAAGTTCGCGCAGGATCCGCCCTAACAGATTCCAATGGAACTCTTG
TCGATGTGGCCGCTTTAATAATCCACGAAGAATATGCGTTTGATCTTAAT
ATAAACGACATCGCAATCGTGAGGTTAAGTACGCCACTTGAGTTCACAAG
CAAAGTTCAACCCATTCCTTTGGCTAAGACGAATCCTTATCCTATATCGA
TTGCCCTCGTCTCTGGCTGGGGAGTGTCTTATATCTTAAACGATTCGACG
AATTTATACCCAACACATCTTCAAGGATTAGCCCTGCACATCAAAAGCAT
TTTCTCCTGCAGACTCTTTGATCCTTCACTACTATGCGCAGGCACTTATG
GAAGAACCGCTTGTCATGGCGACTCTGGAGGACCATTGGTGGTCAACAAA
CAACTTGTGGGTGTTGTCTCCTGGGGTCGAAAAGGTTGCGTATCCAGTGC
ATTCTTCGTCAGTGTTCCTTATTTCCGTGAATGGATCTTAAATGCTATTG
CCTCAATTCAGGCAAGCTTTCTAGACCAT
FMO10806.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:32:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17234-RA | 808 | CG17234-RA | 29..787 | 3..761 | 3765 | 99.7 | Plus |
Send2-RA | 774 | CG18125-RA | 35..720 | 9..748 | 600 | 73.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:32:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2253073..2253831 | 3..761 | 3765 | 99.7 | Plus |
2L | 23513712 | 2L | 14346452..14346654 | 211..9 | 445 | 81.3 | Minus |
2L | 23513712 | 2L | 14346229..14346349 | 473..353 | 350 | 86 | Minus |
2L | 23513712 | 2L | 14345969..14346134 | 748..583 | 305 | 78.9 | Minus |
2L | 23513712 | 2L | 14346369..14346442 | 318..245 | 205 | 85.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:32:34 has no hits.
FMO10806.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:16 Download gff for
FMO10806.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17234-RA | 1..756 | 9..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:54:08 Download gff for
FMO10806.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17234-RA | 26..790 | 1..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:18 Download gff for
FMO10806.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17234-RA | 26..790 | 1..765 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:18 Download gff for
FMO10806.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2253070..2253834 | 1..765 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:54:08 Download gff for
FMO10806.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2253070..2253834 | 1..765 | 99 | | Plus |