FMO10810.5prime Sequence
1130 bp (1013 high quality bases) assembled on 2011-11-17
> FMO10810.5prime
CAGTCGACATGAGAGTCAGGTGGAACCATTTCAAGTTATTGCTGTTTTGG
CTAACGGTTTTAGCTGTCTTGGCCTTTGAAGCCGAGGCCAGGAAGCGTGT
TAGGATTGGATTGCACAAGAATCCTGAACCAATTGAGGAGAACATAAAGA
ACGAATTGAAGACCCTTTCCATTAAACACAATTTAAATGTTGATGATACA
AAAGCTAAAACGAAAACAGATACCAAGGTCCCAGGATCAAAAGTCGCAAC
GCTAGAAAATCTATACAACACGGAGTACTACACCACATTAGGATTCGGAA
ATCCGCCGCAGGATTTGAAAGTGCTGATCGACACTGGTTCGGCGAATCTC
TGGGTGCTGTCATCCAAGTGTCCAGACTCGGTTGCACCCTGTGCCAATCG
CATAAAGTACAACTCAAGTGCTTCCACAACCTACAGGGCTATCAATACCG
CATTCAATATTGCATACGGTTCCAATTCAGAGGAAGGACCTATTGCACTC
TCCGGCTTTCAGTCCCAGGACACAGTAAACTTCGCCGGATACTCCATTAA
AAATCAGATCTTCGCCGAAATCACCAATGCACCAGAGACCGCATTTCTGA
AGTCCCAGCTCGATGGAATTTTGGGATTGGGGTTCGCCAGCATAGCCATT
AATAGTATTACCCCACCCTTCTACAACTTAATGGCCCAAGGTCTAGTAAA
CCGATCTGTGTTTTCGATCTACTTGAATAGAAATGGCACCAATGCCATTA
ACGGTGGGGAGCTGATCCTGGGAGGATCGGATTCGGGTCTGTACAGCGGG
TGTTTGACCTATGTGCCAGTTTCCAGCGCAGGATACTGGCAGTTTACAAT
GACTAGTGCCAATCTGAATGGATTTCAGTTTTGTGAAACTGCGAGGCCAT
ACTCGATGTAGGCACTTCCCTAATTGTTGTGCCTGAGCAAGTCCTAGATA
CCATCAACCAAATATTGGGAGTTCTCAACCCGACGGCTTCGAATGGGAGT
CTTTTATTGAAATGCTCCCTCGATCGGCGATCTTCCGACATGTCTCACCG
TTGGCGCGCCGGAAGTTCCTGAGTCTAACGACTACGTTGCTCGAAATGAT
ACTGTGTCTCGGAATTCCCAGCATGAACGG
FMO10810.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:31:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31926-RB | 1612 | CG31926-RB | 287..1420 | 8..1130 | 5150 | 97.7 | Plus |
| CG31926-RA | 1343 | CG31926-RA | 18..1151 | 8..1130 | 5150 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1495746..1496775 | 8..1037 | 4935 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:31:31 has no hits.
FMO10810.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:10 Download gff for
FMO10810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31926-RA | 1..1133 | 9..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:37 Download gff for
FMO10810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31926-RA | 13..1151 | 1..1130 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:52 Download gff for
FMO10810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31926-RA | 13..1151 | 1..1130 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:52 Download gff for
FMO10810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1495741..1496825 | 1..1082 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:37 Download gff for
FMO10810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1495741..1496825 | 1..1082 | 98 | <- | Plus |
