FMO10812.5prime Sequence
368 bp (368 high quality bases) assembled on 2011-11-17
> FMO10812.5prime
CAGTCGACATGCGATGGCAGTTGGCAATTATGTGGCTTTTCGCCTCCGCG
TTTGCAGTACCTTTCATAAAGTGGCGCCGCCAAATAGTTACGCCGAAGCA
CTTGATGGCACCACCTTTGTCACCCATCGCACAGGACAAGGTTGTGGTCA
CCCCGCAGAAGCTTAGAGAAGTGGCTGACTTTAAGGCCATGATCCAAAAG
GCCGTCGATGAGAACACTTACGTGGTGGCCGCTGCACCATCAAAGGATTT
TCTAGCGACACTGGGTGGAAATTGGGGAGCACCTATATCCTTGCCTCACT
CCTGGACCGCGCCAGCCTTTAATCTTACCTTTTTTTGGCATGGATTTGGC
GCAAGCTTTCTAGACCAT
FMO10812.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:31:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17169-RB | 532 | CG17169-RB | 18..359 | 9..350 | 1695 | 99.7 | Plus |
CG17159-RF | 4662 | CG17159-RF | 4259..4365 | 350..244 | 535 | 100 | Minus |
CG17162-RH | 4590 | CG17162-RH | 4187..4293 | 350..244 | 535 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:31:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 23084689..23084926 | 9..246 | 1175 | 99.6 | Plus |
X | 23542271 | X | 23085257..23085363 | 244..350 | 535 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:31:50 has no hits.
FMO10812.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:12 Download gff for
FMO10812.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17169-RB | 14..362 | 1..354 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:53:44 Download gff for
FMO10812.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17169-RB | 14..362 | 1..354 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:23:57 Download gff for
FMO10812.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17169-RB | 14..362 | 1..354 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:23:57 Download gff for
FMO10812.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 23084685..23084925 | 1..245 | 97 | -> | Plus |
X | 23085259..23085366 | 246..354 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:53:44 Download gff for
FMO10812.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
XHet | 63503..63743 | 1..245 | 97 | -> | Plus |
XHet | 64077..64184 | 246..354 | 98 | | Plus |