FMO10814.5prime Sequence
647 bp (647 high quality bases) assembled on 2011-11-17
> FMO10814.5prime
CAGTCGACATGATTAAACTTATGTCAGTTAAATACCGCCTATGTTCTCTG
GGAAGTTCCTACGAAGTGATTGAAGATGCCTGCCGGGATAGATCAGGTTT
CTTTAGTTTATTGGAATCCAGGAAATTCAGGATTGTGAGGCGCTGCTTTG
CGAAATACCTGAGTGAAGGCATACCCTCTTATCCTATATATTATTGGTTC
GTCCTCATATTTAGTCTATACGGAGCGTTTAGGAGGTCAATCCTCACCAA
TAAGGTTGATGGGAGCTTCGAAAATCCAAAAAATAAGAGAAGACTCAGAA
TGGCTGGAGCATTTATACAAGCCAATATCTGGATGCATCTGTTGTATGCG
GCTTTATTGGTTTCACCTCATCACATGGCTCCCTGGTTATTCGTCCATTT
GGGGATACTTGCTTGCAAGTTGACTGCGGCGACCATTAAAGGACACTTCA
GATGCCAGGGTGATCTTCGAACCCGGACCACAATAAATGCAATTGTATAT
GTGCTGGTTATAGGTCTAGTTTACCTGGCTATGAGGTCATTTACCACTGC
CTTAGCAAGGGATGTTCCAGAAAACCTAAGGCTCTGCTTGAAATTCATAA
ATCCTTTGCTCAAATATGTAAGAGGCCATGCAAGCTTTCTAGACCAT
FMO10814.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:33:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43049-RB | 724 | CG43049-RB | 79..699 | 9..629 | 3105 | 100 | Plus |
CG43049-RA | 743 | CG43049-RA | 80..718 | 9..629 | 2915 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:33:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18925813..18926083 | 359..629 | 1355 | 100 | Plus |
3L | 28110227 | 3L | 18925169..18925387 | 9..227 | 1095 | 100 | Plus |
3L | 28110227 | 3L | 18925453..18925587 | 227..361 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:33:06 has no hits.
FMO10814.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:19 Download gff for
FMO10814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 76..711 | 2..641 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:54:31 Download gff for
FMO10814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 76..711 | 2..641 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:36 Download gff for
FMO10814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43049-RB | 76..711 | 2..641 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:36 Download gff for
FMO10814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18925166..18925387 | 2..227 | 98 | -> | Plus |
3L | 18925454..18925585 | 228..359 | 100 | -> | Plus |
3L | 18925814..18926095 | 360..641 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:54:31 Download gff for
FMO10814.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18918266..18918487 | 2..227 | 98 | -> | Plus |
arm_3L | 18918554..18918685 | 228..359 | 100 | -> | Plus |
arm_3L | 18918914..18919195 | 360..641 | 98 | | Plus |