Clone FMO10814 Report

Search the DGRC for FMO10814

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:14
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG43049-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10814.5prime Sequence

647 bp (647 high quality bases) assembled on 2011-11-17

> FMO10814.5prime
CAGTCGACATGATTAAACTTATGTCAGTTAAATACCGCCTATGTTCTCTG
GGAAGTTCCTACGAAGTGATTGAAGATGCCTGCCGGGATAGATCAGGTTT
CTTTAGTTTATTGGAATCCAGGAAATTCAGGATTGTGAGGCGCTGCTTTG
CGAAATACCTGAGTGAAGGCATACCCTCTTATCCTATATATTATTGGTTC
GTCCTCATATTTAGTCTATACGGAGCGTTTAGGAGGTCAATCCTCACCAA
TAAGGTTGATGGGAGCTTCGAAAATCCAAAAAATAAGAGAAGACTCAGAA
TGGCTGGAGCATTTATACAAGCCAATATCTGGATGCATCTGTTGTATGCG
GCTTTATTGGTTTCACCTCATCACATGGCTCCCTGGTTATTCGTCCATTT
GGGGATACTTGCTTGCAAGTTGACTGCGGCGACCATTAAAGGACACTTCA
GATGCCAGGGTGATCTTCGAACCCGGACCACAATAAATGCAATTGTATAT
GTGCTGGTTATAGGTCTAGTTTACCTGGCTATGAGGTCATTTACCACTGC
CTTAGCAAGGGATGTTCCAGAAAACCTAAGGCTCTGCTTGAAATTCATAA
ATCCTTTGCTCAAATATGTAAGAGGCCATGCAAGCTTTCTAGACCAT

FMO10814.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:33:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG43049-RB 724 CG43049-RB 79..699 9..629 3105 100 Plus
CG43049-RA 743 CG43049-RA 80..718 9..629 2915 97.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:33:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18925813..18926083 359..629 1355 100 Plus
3L 28110227 3L 18925169..18925387 9..227 1095 100 Plus
3L 28110227 3L 18925453..18925587 227..361 675 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:33:06 has no hits.

FMO10814.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:19 Download gff for FMO10814.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43049-RB 76..711 2..641 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:54:31 Download gff for FMO10814.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43049-RB 76..711 2..641 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:36 Download gff for FMO10814.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43049-RB 76..711 2..641 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:36 Download gff for FMO10814.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 18925166..18925387 2..227 98 -> Plus
3L 18925454..18925585 228..359 100 -> Plus
3L 18925814..18926095 360..641 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:54:31 Download gff for FMO10814.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18918266..18918487 2..227 98 -> Plus
arm_3L 18918554..18918685 228..359 100 -> Plus
arm_3L 18918914..18919195 360..641 98   Plus