FMO10819.5prime Sequence
149 bp (149 high quality bases) assembled on 2011-11-17
> FMO10819.5prime
CAGTCGACATGCCTTGCAAGGGATGTGGAAACAACTGCCAGTGCTCAGCC
GGAAAGTGCGGAGGTAACTGCGCCGGAAACAGCCAATGCCAATGCGCCGC
CAAGACGGGAGCCAAGTGCTGCCAGGCCAAGGCAAGCTTTCTAGACCAT
FMO10819.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:33:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MtnE-RA | 344 | CG42872-RA | 71..193 | 9..131 | 615 | 100 | Plus |
| MtnE-RB | 604 | CG42872-RB | 71..193 | 9..131 | 615 | 100 | Plus |
| MtnB-RC | 456 | CG4312-RC | 94..161 | 14..81 | 175 | 83.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:33:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20534432..20534529 | 131..34 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:33:41 has no hits.
FMO10819.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:22 Download gff for
FMO10819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42872-RA | 64..193 | 1..131 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:54:47 Download gff for
FMO10819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MtnE-RA | 64..193 | 1..131 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:53 Download gff for
FMO10819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MtnE-RB | 64..193 | 1..131 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:53 Download gff for
FMO10819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20534432..20534529 | 34..131 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:54:47 Download gff for
FMO10819.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16360154..16360251 | 34..131 | 100 | <- | Minus |
