FMO10820.5prime Sequence
188 bp (188 high quality bases) assembled on 2011-11-17
> FMO10820.5prime
CAGTCGACATGAAGACTCCGCTATTTCTCCTCTTGGTCGTATTGGCTTCC
CTCCTGGGATTGGCCTTATCCCAGGATCGAAATGATACGGAGTGGATCCA
AAGTCAGAAGGATCGTGAGAAGTGGTGCCGGCTAAACTTAGGACCCTACC
TCGGTGGCAGATGCCGAAAAGCAAGCTTTCTAGACCAT
FMO10820.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:33:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dup99B-RA | 257 | CG33495-RA | 28..190 | 8..170 | 815 | 100 | Plus |
Dup99B-RB | 310 | CG33495-RB | 28..143 | 8..123 | 565 | 99.1 | Plus |
Dup99B-RB | 310 | CG33495-RB | 188..243 | 115..170 | 280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:33:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29715235..29715350 | 123..8 | 565 | 99.1 | Minus |
3R | 32079331 | 3R | 29715135..29715190 | 170..115 | 280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:33:50 has no hits.
FMO10820.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:23 Download gff for
FMO10820.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dup99B-RA | 20..195 | 1..176 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:54:52 Download gff for
FMO10820.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dup99B-RA | 20..195 | 1..176 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:58 Download gff for
FMO10820.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dup99B-RA | 20..195 | 1..176 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:58 Download gff for
FMO10820.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29715130..29715190 | 115..176 | 96 | <- | Minus |
3R | 29715244..29715358 | 1..114 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:54:52 Download gff for
FMO10820.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25540852..25540912 | 115..176 | 96 | <- | Minus |
arm_3R | 25540966..25541080 | 1..114 | 97 | | Minus |