FMO10825.5prime Sequence
544 bp (544 high quality bases) assembled on 2011-11-17
> FMO10825.5prime
CAGTCGACATGAAGTTGACAAAGTTATGGTTGCTTTTTGTGTGCCTGGGG
CTTTTCGTTACCCTGGTTGTGAGTGCCGATACGGACTCGGATGCCGATTC
GGATTCATCCGCCGATTCGGATTCATCCGCCGATTCCGATGAGAATACAA
CCGCATCCGGATCGATAGTAACCTCAACCACGGAGTCCAGTGCCACGAAC
AGTTCCGGTTCCTCAGATGATGCTTCTGGCAGTAGTTCCGATGTGGACGA
TGGTTCCGATGATGATACTGATTCTGGATCCGATACGGATTATGATACAC
CTACTACAGCTCCAGTTGTTAAAAAGAGGGCCAATAGGAAGAAGGCTAAC
AATAACAAGAAGAGAGCTAGCAACTATATGAAGAAGGCCAACAATAACAA
CAACAACAAGAAGAGGGCCAACAGCAACAACAATCGCAAAAGTGTGTTTT
GTCCAACAACAACAATAAAAAGAAGGCATCCAACAACAACAACAGGCGCA
GGAACAACAATTCCAGGAGGCGTGGTGCAAGCTTTCTAGACCAT
FMO10825.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:34:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pig1-RB | 690 | CG10790-RB | 51..572 | 3..526 | 2465 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:34:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3248718..3249239 | 526..3 | 2435 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:34:22 has no hits.
FMO10825.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:26 Download gff for
FMO10825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 49..578 | 1..532 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:06 Download gff for
FMO10825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 49..578 | 1..532 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:12 Download gff for
FMO10825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pig1-RB | 49..578 | 1..532 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:12 Download gff for
FMO10825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3248712..3249239 | 1..532 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:55:06 Download gff for
FMO10825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3142745..3143272 | 1..532 | 97 | | Minus |
