Clone FMO10826 Report

Search the DGRC for FMO10826

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:26
Vector:pMK33-CFH-BD
Associated Gene/Transcriptzen2-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10826.5prime Sequence

722 bp (722 high quality bases) assembled on 2011-11-17

> FMO10826.5prime
CAGTCGACATGTATCCTTGCGTCGAGTTAAACGTAGAAGCCGCTCCCACG
GCAACAACAAGGTCTTCGGAGAAATCAAAGAGATCTCGCACGGCATTCAG
CAGTCTTCAGCTAATCGAACTAGAAAGGGAGTTCCATCTCAACAAATATT
TAGCCCGAACCAGGCGAATCGAGATATCACAGCGTTTGGCACTCACAGAG
AGACAGGTTAAGATCTGGTTCCAAAATCGTCGCATGAAACTCAAGAAGTC
GACCAATAGGAAGGGTGCCATTGGAGCGCTGACCACATCTATTCCACTTT
CTTCCCAGTCGAGCGAAGATCTTCAAAAGGACGACCAGATCGTAGAGCGT
CTCCTTCGATATGCCAACACAAATGTGGAAACAGCTCCACTCCGGCAGGT
TGATCACGGTGTCCTGGAGGAGGGTCAAATTACACCACCCTATCAGAGCT
ACGATTACCTCCATGAATTTTCTCCTGAGCCCATGGCTCTTCCCCAACTG
CCCTTCAATGAATTCGATGCTAACTGGGCGAGTTCATGGCTGGGCCTTGA
GCCAACGATTCCTATCGCAGAAAATGTAATTGAACACAATACACAGGATC
AGCCAATGATACAGAATTTCTGCTGGGACTCGAATAGCTCTTCTGCTTCA
TCGTCGGATATTTTGGATGTTGACTATGACTTTATTCAAAATTTGTTGAA
CTTTGCAAGCTTTCTAGACCAT

FMO10826.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:34:31
Subject Length Description Subject Range Query Range Score Percent Strand
zen2-RB 940 CG1048-RB 128..823 9..704 3480 100 Plus
zen2-RA 935 CG1048-RA 123..818 9..704 3480 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:34:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6743252..6743947 704..9 3480 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:34:30 has no hits.

FMO10826.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:26 Download gff for FMO10826.5prime
Subject Subject Range Query Range Percent Splice Strand
zen2-RB 130..828 9..708 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:10 Download gff for FMO10826.5prime
Subject Subject Range Query Range Percent Splice Strand
zen2-RA 123..821 9..708 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:15 Download gff for FMO10826.5prime
Subject Subject Range Query Range Percent Splice Strand
zen2-RA 123..821 9..708 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:15 Download gff for FMO10826.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 6743249..6743947 9..709 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:55:10 Download gff for FMO10826.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2568971..2569669 9..709 99   Minus