FMO10832.5prime Sequence
1119 bp (1004 high quality bases) assembled on 2011-11-17
> FMO10832.5prime
CAGTCGACATGACAATGTCGATGTATTCGACGACGGATAAAATGAAAATG
TCAGCGCCCAGTTGTTTTCCAGGACGCTACAGTCCCTCCTATCGAAGTTC
GGAGCAAATGCGTCGCTGCATGCCAAATCCATCTGGTGATATCTTCGCGG
GCATCAACGATGGAATCCTCAGCAGAGCGGAGGCCCTGGCCGCCGTCGAC
ATCCAGAAGCACCAAGCCCAGCATGTACATAGCCAAATGCCCTCCCAAAT
TAAGCACGACGTCATGTACCATCATCACTCCATGAGTGGGCCTCCCCAGC
GTCCGTTGCAGGAAAATCCTTTTTCTCGACAGATGCACCACTCGATGGAC
CAACTGGACATGCTGGATCCGACGGGCTCGATGACCACACTGGCGCCCAT
CTCGGAGTCGCCGCTAACGCCCACACACCAACACCTGCACGGTTCCTATC
ACAGCATGAATCACATGATGAGCCACCACCATCCGGGCACGTTAAGTGGC
CATACGGGGGGACATCATGGACACTCGGCGGTACATCATCCTGTTATCAC
GGCGGCAGTGGCTGCCGCTGGCCTGCATCCCGACACAGATACCGATCCTC
GCGAGCTGGAGGCGTTTGCGGAGCGATTCAAGCAGCGGCGCATCAAGCTG
GGTGTCACGCAGGCGGACGTGGGCAAAGCCCTGGCCAATCTCAAGTTACC
TGGCGTCGGAGCGCTGTCGCAGAGCACGATCTGTCGATTCGAGAGCCTGA
CCCTGTCCCACAACAACATGATCGCCCTTAAGCCCATCCTGCAGCGTGGC
TCGAGGAGGCCGAGGCGCACGCGAAAACAAGCGGCGCGATCCGGATGCGC
CCAGTGTCCTGCCGGCGGGCGAAAAGAAAAGGACTTCCATTGCGGCACCT
GAAAAGCGTTCTCTGGAAGCCTACTTCGCCGTCCAGCCGAGCCATCCGGT
GAGAAAATCGCAGCGATGCCGAAAGCTGGATTTGAAGAAAACGTGGTGGG
CCGTCTGTTCTGCATCACGTCAAAACAAAAACGTATAAGTAAGTATGTAC
ACATCATGACTGCCACGTTCCGCGGAATTGATCCCAAGCTTCTGACATTC
GTGGACGCGGCCAGGTAAT
FMO10832.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:35:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
acj6-RF | 2594 | CG9151-RF | 750..1835 | 8..1079 | 4915 | 97.9 | Plus |
acj6-RI | 4343 | CG9151-RI | 750..1841 | 8..1079 | 4845 | 97.3 | Plus |
acj6-RH | 2573 | CG9151-RH | 750..1814 | 8..1079 | 4590 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:35:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15354226..15354459 | 882..651 | 1055 | 98.7 | Minus |
X | 23542271 | X | 15354754..15354955 | 511..310 | 1010 | 100 | Minus |
X | 23542271 | X | 15371511..15371688 | 312..135 | 890 | 100 | Minus |
X | 23542271 | X | 15354534..15354677 | 653..510 | 720 | 100 | Minus |
X | 23542271 | X | 15378188..15378315 | 135..8 | 640 | 100 | Minus |
X | 23542271 | X | 15353270..15353387 | 991..877 | 440 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:35:24 has no hits.
FMO10832.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:30 Download gff for
FMO10832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
acj6-RF | 134..1197 | 1..1057 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:38 Download gff for
FMO10832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
acj6-RF | 134..1197 | 1..1057 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:40 Download gff for
FMO10832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
acj6-RF | 744..1807 | 1..1057 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:40 Download gff for
FMO10832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15371512..15371688 | 135..311 | 100 | <- | Minus |
X | 15378189..15378318 | 1..134 | 97 | | Minus |
X | 15353221..15353382 | 882..1036 | 93 | <- | Minus |
X | 15354227..15354458 | 652..881 | 98 | <- | Minus |
X | 15354536..15354676 | 511..651 | 100 | <- | Minus |
X | 15354755..15354953 | 312..510 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:55:38 Download gff for
FMO10832.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15265545..15265721 | 135..311 | 100 | <- | Minus |
arm_X | 15272222..15272351 | 1..134 | 97 | | Minus |
arm_X | 15247254..15247415 | 882..1036 | 93 | <- | Minus |
arm_X | 15248260..15248491 | 652..881 | 98 | <- | Minus |
arm_X | 15248569..15248709 | 511..651 | 100 | <- | Minus |
arm_X | 15248788..15248986 | 312..510 | 100 | <- | Minus |