FMO10833.5prime Sequence
1036 bp (978 high quality bases) assembled on 2011-11-17
> FMO10833.5prime
CAGTCGACATGATGCTTCAGTTTATCGGCCTAATTTTGGCGGTCGTGATT
CTGCGAGAGATTCGGGCACGTGAGGCGATCGCAACCATTCCAGATGTGGG
TCAGATAATCAAAGATCTCGATGGACTGCACATCGATGGAGAAATGTTTC
ATCAAGGTTCTCCCTGCAGAGTGGATGTGCAAAATGATCTGCCCCGTTTG
GATAAAGTGCAGCCGCTGTACCTGCGCCCAGGAACAGATCTCTACTGGCT
GCCCAATGCTTATGGGCACCTGGAGGTTCAACGCGGCGCCAGCATCGAGC
TGCACTGCAGCCATTCGTTCGCGCCCGCGAATGGAGAGTCTTTGGATGCG
AAGCTGCGTTCCATTCGGGTGAAGTGCGTGCAGGACACCACCTTCGAGTG
GATGGGGGCTAAAATCCATTTCAGCGACTTTGTCTGCAATCACTCCATGC
CCTACACCGTGGAGCGATTGGACAGGAGTTGTGGCAGCGACACTCCGAGT
CCATCCACCTCGTACTTGTATCGCGTGGGCTATGACACCGGAGATGGCAG
ATTTGTGGCCACCATGGAGCTGTGCCACGACCCAAATCAACTGCGCACCC
ACTACGCCCACCATCAACTGACACCGGCGAATGTGCACTTCCAGAAAAAA
TTGAAACGCCCGAGGTTTAGCACCGCCGGCCATTTCACGGGCTTTGACAT
GGCCAGAATTTATTCGCCCAAGAGCCAGGAGAAACTGATGGTGCCCGGCC
TCATTGACGTGAAGAGTGGTCTGTTCCTGGCCCGCGGACATTTGACGGCC
AAAGCGGATCTAATCTATGCTAGCCAACAGAAGAGCAGCTTCAACTACAT
GAACGTGGCGCCGCAATGACAGAGCTTCAATGGTGGTCAGTGTCCAGCTG
GAGGATCCACCCGACAATATGTGCTCGTTCGGGCATCCCGGCCACTGTGT
ATTACGGGCATCTATGGCGAAATGACGTGCCTGCAGCATAGTCCCTCCTC
ATGACCACCATTGCTATAAACATAGGGTGGGTGGCC
FMO10833.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:35:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14118-RA | 1637 | CG14118-RA | 56..1087 | 9..1036 | 4760 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:35:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12893323..12894208 | 155..1036 | 3840 | 97.1 | Plus |
| 3L | 28110227 | 3L | 12892713..12892862 | 9..158 | 750 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:35:32 has no hits.
FMO10833.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:31 Download gff for
FMO10833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14118-RA | 49..1046 | 1..994 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:43 Download gff for
FMO10833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14118-RA | 49..1046 | 1..994 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:42 Download gff for
FMO10833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14118-RA | 49..1046 | 1..994 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:42 Download gff for
FMO10833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12892706..12892860 | 1..156 | 97 | -> | Plus |
| 3L | 12893325..12894167 | 157..994 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:55:43 Download gff for
FMO10833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12885806..12885960 | 1..156 | 97 | -> | Plus |
| arm_3L | 12886425..12887267 | 157..994 | 98 | | Plus |
