Clone FMO10835 Report

Search the DGRC for FMO10835

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:108
Well:35
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12506-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10835.5prime Sequence

347 bp (347 high quality bases) assembled on 2011-11-17

> FMO10835.5prime
CAGTCGACATGCGTTCCTTCATTCTGATTGCCCTCTTCGCCCTGATTGCC
CTGGCTGCTGCTCAAGGCGGACCACAAGGTGGACAGCAGGGTGGGCAAGG
AGGATCTCAAAATGGTCAGCAAGGAGGCCAGCAGGGAGGCTCCCAGGAAG
GATCCCAGGAAGGATCCCAGGAAGGACAACAGGGAGGTCAGCAGGGAGGT
CAGCAGCAGGGTGGTCCTGGCGGTCCATGGGGTCTGCCTCCGAATGGAAC
TGAACTCTCCAACAGTACCACAACTTCGACCACTGAGGCTACCAGCACTG
AATCCAGCAGCACAGAGGTTTCCTCTTCGGCAAGCTTTCTAGACCAT

FMO10835.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:34:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG12506-RA 471 CG12506-RA 49..369 9..329 1605 100 Plus
CG13946-RA 406 CG13946-RA 7..299 9..325 1010 89 Plus
CG13947-RA 483 CG13947-RA 32..117 9..94 235 84.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:34:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 773595..773915 9..329 1605 100 Plus
2L 23513712 2L 776542..776834 9..325 945 88 Plus
2L 23513712 2L 779204..779289 9..94 235 84.9 Plus
Blast to na_te.dros performed on 2014-11-27 20:34:05 has no hits.

FMO10835.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:24 Download gff for FMO10835.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12506-RA 14..352 2..343 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:00 Download gff for FMO10835.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12506-RA 42..380 2..343 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:04 Download gff for FMO10835.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12506-RA 42..380 2..343 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:04 Download gff for FMO10835.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 773588..773926 2..343 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:55:00 Download gff for FMO10835.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 773588..773926 2..343 97   Plus