FMO10840.5prime Sequence
605 bp (605 high quality bases) assembled on 2011-11-17
> FMO10840.5prime
CAGTCGACATGATGGAAGGTGAAAGTTCTAAGTCGATCCAAGGCAACATC
GTGGGTCTTAAGAGTACCAACGCCGTGATACTGGCCACCGACTCGAAGGA
ATACGAAATGTATCTAATAGATGACCGCATTTACTGCTGCGCACCTCGTT
CCGGCATCGATCGGAACATAGTTCTGGAAGTGAGTTCAAAGGTGGCAAAT
CTAGTCCGGGATCGCGGCCAGAATGTGACCGTGTCCCAGGTGCGGGACAT
GTTTTGCGAAAAGTACCAGACCGCCGAATCCCCAAATGTCATGATAGCTG
GCCAGGACAGCAGGGGCCTTCACTTATTCAGCATGGAGTGTGGAAAGTCA
CGCATGGTGATGTATGGTGCAAAGGGCAGAGATAAGGAGAACATTGTGGA
CTTTCTCTCGAAAGACTGGAATGATTTCATAAACCTCAGCGAGGCTGAAC
AGTTGGCCAGGAAAGCGCTTAGGTGGGAGCACGTGGAAATGTGCACCATC
TATAGGGCTAAAGAAATCGAGGAACAAGGTGCCAACATGGACTTCGATAT
GGACGACGAGACCTCTGTATCGCCGGCCAGCAATTTCGCAAGCTTTCTAG
ACCAT
FMO10840.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:36:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
yip3-RB | 788 | CG13549-RB | 106..684 | 9..587 | 2865 | 99.7 | Plus |
yip3-RA | 1249 | CG13549-RA | 567..1145 | 9..587 | 2865 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:36:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23244148..23244601 | 587..134 | 2270 | 100 | Minus |
2R | 25286936 | 2R | 23244652..23244761 | 133..24 | 520 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:36:09 has no hits.
FMO10840.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:35 Download gff for
FMO10840.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
yip3-RA | 454..1032 | 9..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:55:59 Download gff for
FMO10840.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
yip3-RA | 567..1145 | 9..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:56 Download gff for
FMO10840.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
yip3-RA | 567..1145 | 9..587 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:56 Download gff for
FMO10840.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23244148..23244601 | 134..587 | 100 | <- | Minus |
2R | 23244652..23244759 | 26..133 | 98 | <- | Minus |
2R | 23244817..23244833 | 9..25 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:55:59 Download gff for
FMO10840.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19131671..19132124 | 134..587 | 100 | <- | Minus |
arm_2R | 19132175..19132282 | 26..133 | 98 | <- | Minus |
arm_2R | 19132340..19132356 | 9..25 | 100 | | Minus |