FMO10843.5prime Sequence
359 bp (359 high quality bases) assembled on 2011-11-17
> FMO10843.5prime
CAGTCGACATGGACATTAACCCAATAATCAGATCTATTCTCAGCCGCTTC
AGAGGCTGCACCATCAGAAGTTATCTGGTTGTTCTGCCCGATCAGAGTCG
CATAGAAAATCAACTAAAACTGGAGGATCTGCAAACAGAACGCGGAATCT
TGGATCTGCAATCCCATGAGCTGGCACTCAAGCAAAAGCGCGTCGAGGCC
AATCTAACCGACCTGACCCGCTGCATCCGTGGCATGGAGTTCGATGTGAA
GGTGAATTCCAATCGCGAGAGGAAGGAGAGAAAATCTGATCGACGCCCCC
CAGCTGATAAGAAATCACCCAAAGTCGGTGATTTCAGCGAAGCAAGCTTT
CTAGACCAT
FMO10843.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:36:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10332-RA | 739 | CG10332-RA | 41..374 | 8..341 | 1655 | 99.7 | Plus |
| IM18-RA | 739 | CG33706-RA | 41..374 | 8..341 | 1655 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:36:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23601279..23601482 | 341..138 | 1020 | 100 | Minus |
| 2R | 25286936 | 2R | 23601550..23601622 | 138..66 | 350 | 98.6 | Minus |
| 2R | 25286936 | 2R | 23601674..23601733 | 67..8 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:36:34 has no hits.
FMO10843.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:58:37 Download gff for
FMO10843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10332-RA | 35..380 | 1..345 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:56:11 Download gff for
FMO10843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10332-RA | 35..380 | 1..345 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:26:04 Download gff for
FMO10843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM18-RA | 35..380 | 1..345 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:26:04 Download gff for
FMO10843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23601273..23601482 | 138..345 | 99 | <- | Minus |
| 2R | 23601551..23601620 | 68..137 | 98 | <- | Minus |
| 2R | 23601674..23601739 | 1..67 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:56:11 Download gff for
FMO10843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19488796..19489005 | 138..345 | 99 | <- | Minus |
| arm_2R | 19489074..19489143 | 68..137 | 98 | <- | Minus |
| arm_2R | 19489197..19489262 | 1..67 | 94 | | Minus |
